Cordyceps militaris: CCM_04418
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Entry
CCM_04418 CDS
T03108
Name
(RefSeq) RNA polymerase II subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cmt
Cordyceps militaris
Pathway
cmt03020
RNA polymerase
cmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCM_04418
09124 Replication and repair
03420 Nucleotide excision repair
CCM_04418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_04418
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_04418
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CCM_04418
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CCM_04418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
18166441
NCBI-ProteinID:
XP_006669629
UniProt:
G3JET7
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MDGMNYEPMMTDEDAEQPRVTILAVGKARVKAADSTKVEFVLAKTSLAFANSLRRVIQAE
VPTVAIELVEIEVNTSVLADEFIAHRLGLIPLDSKDVDELNYSRDCDCDHYCEQCSITLT
LHAKCTTDENMKVYARDLIVDGRHATSIGTPVINDPDGVGCLLAKLRRDQELRLKCVAKK
GIAKEHAKWMPTSAVGFEYDPHNKLHHLDMWFENNTDPDKEWPKSKYAGWEPENKGEPFN
YDAVPENFFFDVETSGSMEPDQIVQSGIRVLQQKIGGLLKSLDPRKYGGEEAGGGGGGDF
DGPRSPDMNLEGGTTPWQDGGYTTPYGGGNTTAYGGGGGGGGGNTAYGGGAGYGTTPYGG
SSWQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatgaactacgagccgatgatgacggatgaggatgcggagcagcctcgtgtg
acgattttggcggtaggaaaagctcgagtgaaagctgccgatagcacaaaagtcgagttt
gtcctggcgaagacgagcctcgcctttgccaactccctgcgtcgcgtcatccaggccgag
gtacccacagtggccattgagctggtcgagattgaagtcaatacgtcggtgctagccgac
gagttcatcgcgcaccgactgggcctgatcccgctcgactccaaggacgtcgacgagctc
aactactcgcgcgactgcgactgcgaccactactgtgagcagtgcagcatcacgctcacg
cttcacgccaagtgtaccacggacgagaacatgaaggtctacgcgcgcgacctcatcgtc
gacggtcgccacgccacgtccattggcacccccgtcatcaacgaccccgacggcgtcggc
tgcctgctcgccaagctgcgcagggaccaggagctgcggctcaagtgcgtcgcgaaaaag
ggcatcgctaaggagcatgccaagtggatgcccacgtcggccgtgggtttcgagtacgac
ccgcacaataagctgcaccacctggacatgtggttcgagaacaataccgatcccgacaag
gaatggccaaagagtaaatacgcggggtgggagccggagaacaagggtgagccgttcaac
tacgacgccgtaccggaaaacttcttcttcgacgtcgagacctcgggcagtatggagccc
gaccagattgtgcagagcggcatccgcgtgctgcagcaaaagattggaggcctgctgaag
agcctcgatccgcgcaagtacggcggcgaggaggcaggcggcggcggtggtggcgacttt
gacggacctcgtagcccggacatgaacttggagggcggcaccacaccctggcaggacggc
ggctacacgacgccgtacggagggggcaacacgacggcctatggcggcggcggcggtggt
ggtggcggcaacacggcttacggcggtggtgcgggatacggtaccacaccgtacggcggg
tcgagttggcaatag
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