KEGG   Cordyceps militaris: CCM_04418
Entry
CCM_04418         CDS       T03108                                 
Name
(RefSeq) RNA polymerase II subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
cmt  Cordyceps militaris
Pathway
cmt03020  RNA polymerase
cmt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CCM_04418
  09124 Replication and repair
   03420 Nucleotide excision repair
    CCM_04418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmt03021]
    CCM_04418
   03400 DNA repair and recombination proteins [BR:cmt03400]
    CCM_04418
Transcription machinery [BR:cmt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CCM_04418
DNA repair and recombination proteins [BR:cmt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CCM_04418
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 18166441
NCBI-ProteinID: XP_006669629
UniProt: G3JET7
LinkDB
Position
Unknown
AA seq 364 aa
MDGMNYEPMMTDEDAEQPRVTILAVGKARVKAADSTKVEFVLAKTSLAFANSLRRVIQAE
VPTVAIELVEIEVNTSVLADEFIAHRLGLIPLDSKDVDELNYSRDCDCDHYCEQCSITLT
LHAKCTTDENMKVYARDLIVDGRHATSIGTPVINDPDGVGCLLAKLRRDQELRLKCVAKK
GIAKEHAKWMPTSAVGFEYDPHNKLHHLDMWFENNTDPDKEWPKSKYAGWEPENKGEPFN
YDAVPENFFFDVETSGSMEPDQIVQSGIRVLQQKIGGLLKSLDPRKYGGEEAGGGGGGDF
DGPRSPDMNLEGGTTPWQDGGYTTPYGGGNTTAYGGGGGGGGGNTAYGGGAGYGTTPYGG
SSWQ
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggacggcatgaactacgagccgatgatgacggatgaggatgcggagcagcctcgtgtg
acgattttggcggtaggaaaagctcgagtgaaagctgccgatagcacaaaagtcgagttt
gtcctggcgaagacgagcctcgcctttgccaactccctgcgtcgcgtcatccaggccgag
gtacccacagtggccattgagctggtcgagattgaagtcaatacgtcggtgctagccgac
gagttcatcgcgcaccgactgggcctgatcccgctcgactccaaggacgtcgacgagctc
aactactcgcgcgactgcgactgcgaccactactgtgagcagtgcagcatcacgctcacg
cttcacgccaagtgtaccacggacgagaacatgaaggtctacgcgcgcgacctcatcgtc
gacggtcgccacgccacgtccattggcacccccgtcatcaacgaccccgacggcgtcggc
tgcctgctcgccaagctgcgcagggaccaggagctgcggctcaagtgcgtcgcgaaaaag
ggcatcgctaaggagcatgccaagtggatgcccacgtcggccgtgggtttcgagtacgac
ccgcacaataagctgcaccacctggacatgtggttcgagaacaataccgatcccgacaag
gaatggccaaagagtaaatacgcggggtgggagccggagaacaagggtgagccgttcaac
tacgacgccgtaccggaaaacttcttcttcgacgtcgagacctcgggcagtatggagccc
gaccagattgtgcagagcggcatccgcgtgctgcagcaaaagattggaggcctgctgaag
agcctcgatccgcgcaagtacggcggcgaggaggcaggcggcggcggtggtggcgacttt
gacggacctcgtagcccggacatgaacttggagggcggcaccacaccctggcaggacggc
ggctacacgacgccgtacggagggggcaacacgacggcctatggcggcggcggcggtggt
ggtggcggcaacacggcttacggcggtggtgcgggatacggtaccacaccgtacggcggg
tcgagttggcaatag

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