Cordyceps militaris: CCM_04515
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Entry
CCM_04515 CDS
T03108
Name
(RefSeq) formamidopyrimidine-DNA glycosylase, putative
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cmt
Cordyceps militaris
Pathway
cmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCM_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_04515
Enzymes [BR:
cmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CCM_04515
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CCM_04515
DNA repair and recombination proteins [BR:
cmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCM_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-GeneID:
18166538
NCBI-ProteinID:
XP_006669726
UniProt:
G3JFF3
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MPEIAEIARAVHYLRIHLVGKRIASAEAIDDANVFGKVGTTGAAVAAALKGKKVVSAGTQ
GKYFWITLEKPPHLVMHFGMTGKNDKTAYTNYFKKMEDSEYAVWPPKFWKFSIVTDDEPA
VEVAFTDPRRFGRVRLVDCPGEAIRKHSPLVENGPDPVVDKDRFTEDYLRGKMTSRHVPI
KALLLDQTMISGIGNWVADETLYHAQMHPEQYCDDFSDAEIKKLYESICYVCDLAVEKLG
DSDQFPEHWLFNHRWGKGDKNSPSKLPNGEKLSFITVGGRTSCFAPAIQKKTGRVAASAK
TELAVKKESGEEKVPPKKARKSTSKTIVEKADEGKTIPKKDRKPADKAVKLEGKDTTPSK
GKRSNATTSDGSKSKKVKIEPVADDGGRRRSGRLRK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagattgctgagattgcacgggcagtccactatctgcgcattcacctagttggt
aagcgcattgcttccgctgaggccattgacgatgccaatgtatttggcaaggtcggcacc
actggtgctgctgtagcagctgccctaaagggcaaaaaggttgtgtccgctggcacgcag
ggcaaatacttttggattacattagagaagcctccgcatctagtaatgcatttcggcatg
actggcaaaaatgacaagactgcatacaccaattacttcaaaaagatggaagatagcgag
tacgcagtgtggccgccgaaattctggaaattttccattgtgacagatgatgagcctgct
gtcgaggttgctttcaccgatccccgccgttttggtcgcgtcaggctggtggactgtcct
ggggaagccatacggaaacactcgccgcttgttgagaacggccccgatcctgttgtggac
aaggaccgcttcaccgaggattacctacgcggcaaaatgacatcgcgccatgttcccatc
aaggcactacttctcgaccagaccatgatcagcggcatcggcaactgggttgccgacgag
acgttgtaccacgcccagatgcaccccgagcagtactgcgacgactttagcgatgctgag
atcaagaagctctacgaatctatctgctacgtctgtgacttggctgtggaaaagctgggc
gattcggatcagttcccagagcactggctatttaatcaccgctggggcaagggtgacaaa
aactcgccatccaagcttcccaacggtgagaagctctctttcatcacagtcggcggacgt
acaagttgcttcgctccggctattcagaaaaagacaggccgcgtggcagccagcgctaaa
acggagcttgctgtaaaaaaagagtctggcgaagagaaggtgccacccaaaaaagcccgc
aagtcgaccagcaagactatcgtagaaaaggctgatgaaggaaaaacaatacccaagaaa
gatcgcaaaccagcagacaaggcagtaaaattagagggaaaagacactacgccaagcaaa
ggcaagcgatcgaacgccaccacgagtgacggcagcaaaagcaaaaaggtcaaaattgag
ccggtggcggatgatggtggcagacgcagatcagggaggctcaggaaataa
DBGET
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