Cordyceps militaris: CCM_05013
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Entry
CCM_05013 CDS
T03108
Name
(RefSeq) Nucleic acid-binding, OB-fold-like protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmt03009
]
CCM_05013
Ribosome biogenesis [BR:
cmt03009
]
Eukaryotic type
90S particles
Other 90S particles
CCM_05013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_C
RNase_II_C_S1
Suf
TPR_19
UTP6_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
18167033
NCBI-ProteinID:
XP_006670221
UniProt:
G3JG20
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MSNLKRKDAPGGHPPAKSAKQSKEANPSKTDTPKPTDAPKNAVVSRLKDEEPLFPRGGAS
VLTPLEQKQIQLEAKADAAHDDEFSTGGKPQKKQKRVGASKKSDKKTETKSDDDSVKIES
LNFKKLVKGSIVLGQITRINNLALEVALPNNLTGHVSIVAISEQLTNRLQSGAKDEDVDE
KEDESDGEGEDVDLKSIFEVGQFLRAYVLSTVDGAVSGKSKRKIELSLRPTEANTGLTKD
DAVPHCTVAAAVASVEDHGCIMDLGIDGLSGFLPNAEIDATFKRERLQEGAVFLSQVTAN
QGSGKVAQLTLKQDKIGKVSNHPAEATTINTFLPGTAVNVLITGNSSSGVTGKIMGHVDA
TADLIHSGIGPFGTDVESKYKIGSKVKARIICNFPTSKDPKLGITLLPHLMALTKKRPEG
PKRSSLPLQVIPIASIVEQCTVRHVEADMGLFVDVGVPGLCGFVHISRVKDGKVDALYES
SGPYKAGSTHKGRVVGYSEIDGVFQLSFQKTVLEQKYIRQEDVPVGAVLTCDIEKLIINE
DGVNGLTLQIAEGITGFVPERHLSDVKLQHPEKKFRQGMKIKARVLSNDLIKKRIRLTLK
KTLVNSETPIIRSYDDVKVGSQALGTIIKLESSGARIQFYDELRGFLPISEMSEAYIRDP
SEHFRVGQVVSVHVLDVDPERRRLVVSCKDPGAFGLEKQNALKNISLGDIVSAKVTQKSE
DQVFVELEGSLLKAILPVSHLTDKSASKNQFALKRVSAGQTLSNLVVIDKNDSRRSITLT
QKPSLVHAAAEGRLLKSFEQARPGKLFAGFVKNITATAVFVQFAGSLNALLPKARLAPEA
QAKPDFGLHKNDSIEVRIVSTIPDLNRIMVAPASAPADQDIAGKSESAKAAPADGLAFGS
ITQAKVTSIKETQLNVQIVDSGVQGRIDVANVFGSWDDIPDPKHPLATFHKGQVLRVKVV
GVHDAKDHRFLPISHRSAHSILELTTRQTDLDDTTPNELTFESLKVGQTHVAFVNNLTQQ
YLWVNLSPSVRGRISAMEASDDLSQLNDLEGNFPPGSALKVRVVSINAENNHLDLSARSA
SSNDIVSWDSIKANMILPGKITKVNERQILVKLSESVSGPVHLPDMADNFDGVNTTQYRK
GEIVRVAVVDVDKSNKRLRLSTRPSRIMSSTLPVKDKEISDIAQLSSGDIVRGFVKNVAD
KGLFVLLGGQVSALVKISNLSDRYLKEWKDEFQVDQMVKGRIIFIDNAAKQIEMSLKSSV
VDEDYTPPMTYRDISVGQIVTGKVRKVADFGAFILIDNSANVSGLCHRSQMAENRVQDAT
KLYKEGDVVKAKVLEVDVEKRKISFGLKPTLFEDEDTDMDSDSEQGAPLVDEDDVDDETE
GALLKLIQAQVNDDDDEVEDDDDEDEDDEEDEGEDDEVDGDGDSEMEDAPTGVGLGGGKS
AWTADPFAESGSESEGEAPSKKMDKTKKRKKNEIEVDKTAELDSNGPQTSSDYERLLLGQ
PDSSELWIAYMAFQMQVSELPKAREVAERATRTINMREETEKLNVWVAYLNLEVAYGTKA
TIEEVFRRACQYNDPQEVHERLASIYIQSEKLKEAEALFEAMVKKFGAKTPNVWTNYAHF
LHVTKGEPARARALLPRASQQLGSAHAATIVARFAALEFHSEHGEPERGRTMFTGLLDTW
PKKGDLWNQLLDLEMGVEGGDVTAVRDVFERRTRVRGLKPQQAEKWFRRWTAFEEGVDPK
GKDRVTARAREWAAAFKARKEADAAAAADEDMEE
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcttaagcgaaaggatgcccctggcggtcatcctcctgctaaatccgccaag
cagtccaaagaggcgaacccatccaagaccgacacgcccaagcccaccgacgccccgaaa
aacgccgtcgtttcccgcctcaaagacgaggagcctctctttccccgaggcggcgccagc
gttctcacacctctcgaacagaagcagatccaattggaggccaaggctgacgctgcgcac
gatgacgaattttccaccggtggaaaaccccagaagaaacagaagcgagtcggcgcctcc
aaaaaatcggacaagaaaaccgagaccaagtccgacgacgactctgtaaagattgagagt
ctcaacttcaagaaattggtcaagggctccatcgttctcggtcaaatcacacgcatcaac
aacctcgctctcgaagtcgctctgcccaataacctgaccggccacgtctccattgtggcc
atatctgaacagcttacgaatcgactgcaaagcggcgccaaagatgaggatgtcgacgaa
aaggaagacgaatccgacggcgaaggcgaggacgttgacctaaagtccattttcgaggtt
ggccaattccttcgcgcctatgttctctctacagtggacggcgctgtttccggcaaaagc
aagcgcaagattgagctctctctgcgacctaccgaagccaatacaggcctcacgaaagac
gatgccgtaccccattgcacggtcgccgccgctgtcgccagtgtcgaggaccacggatgc
atcatggatcttggaattgacggcctgagcggattcctccccaacgccgaaatcgatgcc
actttcaaacgcgaacgcctgcaggaaggcgccgtatttctctctcaagtcaccgccaac
cagggcagcgggaaggtcgctcagctcaccctcaagcaggacaaaatcggcaaagtcagc
aaccacccggccgaggcgacaaccatcaacacattcctccctggtaccgccgtcaacgtt
ctcattaccggaaacagcagcagtggtgtgactggaaaaatcatgggacacgtcgacgca
acagccgacctcatccactccggtatcgggccctttggtaccgatgtcgaatcgaaatac
aaaattggctccaaggtcaaggccagaatcatctgcaactttcctacatcaaaagacccc
aagctgggcatcacactgcttccgcacttgatggctcttaccaagaagcgccccgagggc
ccgaagcgctccagtcttcccctacaagtcatccctattgcttcgattgtcgagcagtgc
actgtccgtcatgtggaagccgacatgggcttgtttgttgacgtaggcgttcctggcttg
tgtggtttcgttcatatctcccgtgtcaaggacggcaaggtcgatgccctctacgaatcc
agtggcccttacaaggctggctcaacacacaagggtcgcgttgttggctacagtgaaatc
gacggcgtctttcagctttcattccaaaaaactgtcctcgagcaaaagtatatccgccaa
gaagatgtgcctgttggagccgtcttgacatgcgacattgaaaagcttattatcaacgaa
gacggtgtcaatggtcttactctccagattgccgaaggaatcactggatttgtgcctgaa
cgccacctctccgacgtcaagctgcaacatcccgagaagaaatttcgccagggcatgaag
atcaaggctcgcgtactgagtaatgacctgatcaagaagagaatcagacttacgctcaag
aagactcttgtaaactctgaaacccctattattcgaagctacgacgatgtcaaggtcggt
agccaggctctcggcacaatcattaagcttgagagcagtggtgcccgaatccagttctac
gatgagctacgcggattcctgcccatttccgaaatgagcgaggcctacattcgtgacccc
tcagaacacttccgcgttggccaagttgtcagcgttcatgtgctcgacgttgatcctgag
cgaaggcgcctggttgtctcttgcaaggatcctggcgcgttcggcctagagaaacagaac
gcgctaaagaacatttcacttggagacattgtttctgccaaggttacgcaaaagtcggaa
gatcaagtatttgtcgagctcgagggcagcctcctcaaggccatcctcccggtcagccat
ctcaccgacaaatctgcgtccaagaatcaatttgcgctcaagagggtttctgctggtcag
actctgtcaaatctcgttgttattgataagaacgacagccgccgctcaattaccctaacg
caaaagcccagcctagtccatgctgccgcggaaggaaggctactcaagtcttttgagcag
gccaggccgggcaaactttttgctggctttgtcaaaaatatcacagctactgcggtgttt
gttcaatttgcagggtcactcaacgcactgcttcccaaggcacgtcttgcccccgaggct
caagccaaacccgattttggtctgcacaagaacgactctatcgaagtccgcattgtatcg
accattcccgatctcaaccgcatcatggtcgccccagcctccgcgcctgctgatcaggat
atcgctggcaagagcgaatctgcaaaggctgctcccgctgatggtcttgcctttggctcc
atcacccaagccaaggttacctcgatcaaggaaacacagctgaacgtccagattgtcgat
tctggtgtgcagggccgaatcgatgttgccaacgtgtttggcagctgggacgacattcca
gacccgaagcaccccctcgccacgttccacaaaggccaagtgttgcgcgtcaaggttgtg
ggcgtacacgatgctaaggaccaccgcttcctgcccatttcccacagatctgcccattcc
atcttggagctcaccacgcgccaaactgacctggatgacaccacgcccaatgagctcacc
tttgaatccctcaaggttggacagacccacgtcgcctttgtgaacaacttgacgcaacaa
tatctctgggtcaacttgtcgccctctgtccgtggccgcatctctgccatggaagcttcc
gatgatttgtctcaactgaacgacttggagggcaacttcccccctggctctgctctcaag
gtccgcgtcgtatcgatcaatgccgaaaataaccatcttgatctctctgcgcgctctgca
tcctccaatgatatcgtaagctgggattctatcaaagccaatatgattcttcccggaaag
attaccaaggtcaatgagcggcagattcttgtcaagctcagcgaatcagtttctgggccc
gtccacctgcccgacatggccgacaactttgacggggtcaacactacccagtaccgcaaa
ggtgagattgtccgcgtcgcagtagttgacgtggacaagagcaacaagcgactccgcctt
tccacgcgtccgtcccgtatcatgagctctactctgcccgtcaaggacaaggagattagc
gatattgcgcaactctcttctggtgacattgttcgaggattcgtcaagaatgtagccgac
aagggtctcttcgttctgctgggcggacaggtttctgccctggtcaagatctctaacctg
tcggaccgctacttgaaggagtggaaagatgagtttcaggttgaccaaatggtcaagggt
cgcattatttttattgataatgccgctaagcagatagaaatgagcctcaagtcctccgtc
gtcgacgaagactacacaccgcccatgacgtacagggatatctcggttggccagattgtt
accggcaaggtgcgcaaggtagcggattttggtgctttcatcctgatcgacaactcggcc
aacgtcagtggcctgtgccatcgcagccaaatggccgagaaccgcgtgcaggatgctacc
aaactctacaaggagggcgatgtcgtcaaggccaaggtcctagaggtggatgtcgagaag
cgcaaaatcagctttggcttgaagcctacgctgtttgaggacgaggacacagatatggac
tcggactctgagcaaggtgctcctcttgttgatgaagacgatgttgatgatgaaactgag
ggcgcacttctcaaactcattcaagctcaagtcaacgacgacgatgacgaagtcgaagat
gacgatgacgaagatgaagatgacgaggaggacgagggtgaggatgatgaagttgatggt
gatggagactcggagatggaggatgcccctacaggcgtgggcttgggtggtggcaagtct
gcgtggacggcggatccttttgccgaatcagggtcggaatccgagggcgaagcgccgagc
aagaagatggacaagaccaagaagcgcaagaagaacgagattgaggtggacaagactgcc
gagctcgacagcaacggccctcagacgtcgagcgactacgagcgtctgctcctgggccag
cccgactcgtcggagctttggatcgcctatatggccttccagatgcaggtcagcgagctg
cccaaggcgcgcgaggtggcggagcgggcaacacgcaccatcaacatgcgcgaagagacg
gagaagctcaacgtgtgggtggcgtatctgaacctggaggtggcgtacggcaccaaggct
accatcgaagaggtgtttaggcgggcgtgccagtacaatgacccgcaggaggtgcacgag
cggctggccagcatctacatccagtcggagaagctcaaggaggccgaagcgctatttgaa
gccatggtgaagaagtttggggccaagacaccgaatgtgtggaccaactatgcgcacttt
ctgcacgtcacgaagggtgagccggcgcgggcgcgggcgctgctaccacgggcatcgcag
caactcgggagtgcgcacgcggcgacgattgtggcgcggttcgcggcgctcgagttccat
tcggagcacggcgagccggagcgggggcggaccatgtttacggggctgctcgacacgtgg
ccgaaaaagggcgacttgtggaaccagctgctggacctcgagatgggtgtcgagggcggc
gacgtgacggcggtgcgggacgtgtttgagcggcgcacgcgggtgcgggggctcaagccg
cagcaggcggagaagtggttccggcggtggacagcgtttgaggagggcgtggatcccaag
ggcaaggaccgggtgacggccagggcgcgcgagtgggcggcggcgttcaaggcccgcaag
gaggcggacgctgcggcggcggcggacgaggacatggaggagtag
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integrated database retrieval system
