Cordyceps militaris: CCM_05349
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Entry
CCM_05349 CDS
T03108
Name
(RefSeq) NOT2 family protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cmt
Cordyceps militaris
Pathway
cmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCM_05349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_05349
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CCM_05349
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CCM_05349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18167367
NCBI-ProteinID:
XP_006670556
UniProt:
G3JJ44
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MPYAELSDRNEFDCRCDDMALSALAAASPVPMPLGGVGQEARDRAGSSPPRGQAHGLALL
WDARCAVPQTLRGMPGSFGGQQQQSQQQQNRAVSSRLPNASGNSNSGWAFSGAVPMGNNT
NGGFPTQTRQLGGSVSFAQSLGGSQQAAPLDLSENVPSPDRRRGLAYAAVVKGEFPSLSN
NSQLGNPSQASMWSTPGSRNVSAPVQRNQSTPVSSQHAGQEELYNSTSRLTANHGSLRFA
NQTGPQVTPSSVDDFPPLNRTVNGEERSASLMSSLGISTPSSSSPSLLANNRANEPRSQS
LAGSAVPTTQTLENDNRSRAADRLNKQLANLGNGEGSSGLSVQESLINKVKEDQAQGTVD
PLAGMPDVDKWGLKGLQTLMNNYPDYHALVVGMDPNSLGLDIQSQDCPADIKQQMAAAEL
HTRNWRWHRKLQIWLTKDEQIAPQILGPNHERGWYIVWDANHWQRERREITLHYSDLETV
VNPGAVGA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgccgagttatccgatcgcaatgaattcgactgccgttgtgatgatatggcg
ctgtccgctttggctgccgcgtcacctgtccccatgccacttgggggtgttggccaagag
gctcgcgacagagcaggcagcagccctccaagagggcaggcgcatggactggcactattg
tgggacgcacgatgcgcagtaccgcaaaccctccgcggaatgccaggcagctttggaggc
caacagcagcaatcccagcagcagcaaaatcgcgctgtatcaagtcgattaccgaacgca
tcgggaaacagcaactctggctgggccttcagtggcgcagtacctatgggaaacaacacc
aatggtggcttcccaactcaaacccgacaactaggaggaagtgttagctttgcccaaagc
ttaggaggatcgcagcaagcagcgcccctcgacttgtcagaaaacgttccatcaccggat
cggcgtcgtgggctggcttacgctgctgtggtcaaaggtgaatttccctctttatcgaat
aactctcaacttggcaatccttcgcaagcgtcgatgtggtcgacacctgggtcaaggaat
gtgagcgcgcccgtgcaacgaaaccaatcgactcctgtatcatcccaacacgcaggtcaa
gaagagctatacaactcgacctcaagattgacggcaaaccatggctctctgcgttttgca
aaccagacaggaccgcaggtcaccccaagcagcgtggatgacttcccccctctaaataga
accgtcaacggtgaagagaggagtgctagtctaatgtcgtcactgggtatcagcacgccg
agctcatcctccccgagccttttagcaaacaaccgagcgaatgagccaagatcgcagtct
ttggcgggtagtgcagttcccacaacgcaaacgctagagaacgacaatcggtcgcgagcc
gctgatcgtctaaataagcagcttgcaaacctcggtaatggagaaggctcttcaggcttg
tctgtccaggaaagtctaatcaacaaggtgaaagaagaccaagcgcaaggcactgtagat
cctctcgctggcatgcccgatgttgataaatggggactcaaaggcctgcaaacgctcatg
aataattatcccgactatcatgcgttggttgttggtatggacccgaattcgctagggctt
gacatccaatcccaagactgtcccgctgacatcaagcaacagatggcggcagcagagttg
catacgcgcaattggcgctggcacagaaagctgcagatctggcttaccaaagacgagcag
atcgctcctcaaattctcggtcccaatcatgagagaggatggtatatcgtctgggatgcc
aaccactggcagagagagcggcgggaaatcacactgcactacagtgatttagaaaccgtc
gtgaaccccggggctgttggggcttag
DBGET
integrated database retrieval system
