Cordyceps militaris: CCM_05559
Help
Entry
CCM_05559 CDS
T03108
Name
(RefSeq) transcription elongation factor SPT6, putative
KO
K11292
transcription elongation factor SPT6
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_05559
03036 Chromosome and associated proteins [BR:
cmt03036
]
CCM_05559
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CCM_05559
Chromosome and associated proteins [BR:
cmt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CCM_05559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
SH2
S1
HHH_3
Tex_YqgF
NAM-associated
Motif
Other DBs
NCBI-GeneID:
18167577
NCBI-ProteinID:
XP_006670766
UniProt:
G3JKB7
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MSSSMRDLISAEAEIDDEEDDESFDEGTGGQRKSNRPGDFDDSSEEEEDDDDEEEARKIR
EGFIVEDEDDDDGGDDDEDRPIKRKREHRDREKEEQLDEDDYDLVGEQFGEQPKSQSQSK
FKRLKRGHRGDGGEQNRPAGLEDIFNDEEDEAGEQRGYRPNFRAQADEFDDFIEDDYPED
DDERERAQEDVEVARSKDRGVSGIVDTTGLDKEALDDMEAIFGNGEDYDWALQMEDEEEE
RERDEQGIELKDVFEPSQLKEKLLTDEDNLIRFTDEPERFQLERKQFKNLQLTAEQFRDE
AKWISNQLWPKKGLSQELQAPFGKAVGKVLEFFVVDEVEVPFVFQHRKDYLLHSKKIRKS
THDDPDGPDYSIQSDKLLNQDDLWRILELDIKFRSFIEKKNALEKTFENLRTLEVDDPMV
EDMIPEATTMEELQDLQDYLQFQYGPKLKDLAVMASNNAQVKKPGSKSNVLDRVRNGKAY
YFVKAYGISADQLAKNALRQGKKVTPDDDSQYPMDLADTLIDDNFNTGDQVINAARQMYA
EELAASPRMKKYFRGSYYQLAEISCRRTEKGLRKIDDTHPYYEIKYLQNQTIADLVHQPD
TFLKMMKAEEEGLIEIRLVMPSRFDFRKQLYQEFESENFSDRAEQWREERKKVLDLAYPK
LEKGIAKNIKEVIRTFCQDEVLKMIRQDYYRKLDQAPYKPKGMILGTTPRVLALSNGMGD
PARDPICWAWVPEDGRVLEQGKFGNLGRDESQREAFVELVNRRRPDVIAVCGWSCDTHKL
VRDIESLVSEKALMGPEFEDPETNDYRTEQLEVMVVDDEVARLYKDSPRAVAEHPSLNPV
TRYCVALARYMQNPMKEYAALGKDVISLSFHPCQKLLPQDKLAKYLESAMVDTVNMVGVN
INDAMVDTYTANLLPFIAGLGPRKATSVMKAINANGGSVNTREELVGDPESRKLPVVGPR
VWNNCASFLYIDYDATNPASDPLDNTRVHPEDYELGRKMAADALELDEEDVKAEIDENGP
GAIVRKLFKQGEQERVNELVLDEYADQLLRNFNQRKRATLEAISAELQAEYEELRRSFAP
LTQTEIFTIFTGETKQTLCEGMIVPVNIRVARDDFAIAKLDCGIEGRAEAHEVTSLPSVK
DVLSVGQTARAKILEMDYKAFSVKLSMREDSLRIPYKRPTNYGRDGWDYAQEAADKEELK
VKDKTTGRTQRVVKHPNFKPFNGLQAEEFLGSQAPGEVIIRPSSKGNDHLAITWKVADNV
YQHIDVLEMQKENEFSVGKLLRIGGRYTYSDLDELIVDHVKAMARKVDEMMRHDKYQNRS
RSETEKWLTTYIDANPNRSAYAFCIDTKHPGYFWLCFKASRTAIVIGIPIRVIPQGFELK
GYQYPDMRALCNGFKLRYQNEFSRMGAR
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtatgcgcgatctgatctctgccgaggcagagatcgatgacgaggaagat
gacgagtcctttgacgagggaaccggcggccaacgcaaaagcaatcgaccgggagacttc
gacgattcctccgaggaagaggaggacgacgatgacgaggaggaagcgcgcaagattcgc
gaaggcttcattgtcgaagatgaagacgatgacgacggtggcgatgatgatgaggatcgg
cccatcaagagaaagcgcgagcatcgcgatcgcgaaaaagaagaacaactggacgaagat
gattacgacctcgtaggagaacagtttggcgaacagccaaaatcacaatcacagtccaaa
ttcaagcgtttaaagcgcggtcaccgcggtgatggcggcgagcagaacaggccggctggc
ctagaggacatcttcaacgatgaagaagatgaagccggcgaacaacgaggatacagaccc
aactttcgcgcccaagccgatgagttcgatgattttatcgaggacgactaccccgaggac
gatgacgagcgagagcgagctcaagaggatgtcgaggtcgcccgctccaaggaccgcggc
gtgtctggtatcgttgacacgactggtctcgataaagaagccctggatgacatggaagcc
atatttggcaatggcgaagattacgactgggctctgcagatggaggacgaggaggaggag
cgcgaacgagacgaacagggcattgaactcaaggacgtttttgagccttcgcagctcaaa
gaaaagcttcttaccgacgaagacaacctcatccgctttaccgacgagcccgaacgtttc
cagctcgagcgcaagcagtttaagaacttgcagctcacagctgagcaatttcgcgacgag
gccaagtggatcagcaatcaactgtggcccaaaaaaggcctctcccaggaactgcaggcg
ccttttggcaaagccgttggcaaggttctggaattctttgtcgttgacgaggtggaagtt
ccgttcgttttccagcatcgcaaggactatttgctccactccaagaagattcgcaagtca
actcatgacgatccggatggccccgactactcgattcagtccgacaagctgctgaaccag
gacgatctttggcgaatcctcgagctcgacatcaagttccgatcattcatcgaaaagaag
aatgcactcgaaaagacgtttgagaaccttcgtacactcgaggttgacgacccgatggtc
gaggacatgattcccgaggcaactaccatggaggagctgcaagacttacaagactatctc
cagttccagtacgggcccaagctcaaggatctggctgtcatggccagcaacaatgcccaa
gtcaagaaacctggctccaagagtaatgttttggatcgcgtgcgtaatggcaaggcctac
tactttgtcaaagcctacggcatctccgccgaccagctggcgaagaatgctctccgtcag
ggcaaaaaggtgacgcctgatgatgactcacaatatcctatggatcttgcagacaccctc
attgacgacaacttcaatacaggagatcaggtcatcaatgccgcgagacaaatgtacgca
gaggaactggctgccagccctcgcatgaaaaagtacttccgcggctcatactaccagctt
gccgagattagctgtcgtcgcacagagaagggtctccgcaaaattgacgatacacaccca
tactacgagatcaaatatcttcaaaaccaaacaatcgccgaccttgtccaccagccggac
acttttctcaagatgatgaaagccgaggaggagggtctcatcgagatcaggctcgtcatg
ccttctcgcttcgacttccgtaaacaactctaccaggagtttgagtcagaaaattttagt
gaccgcgccgagcagtggcgagaggagcgcaagaaggtcttggatttggcctatcccaag
cttgaaaagggcattgccaagaacatcaaggaagtcattcgtaccttttgccaggacgaa
gtgctcaagatgattcgtcaagactactacaggaagctggaccaggcgccatacaagccg
aagggtatgatcctgggaacgactccgcgcgtactcgctctctccaacggcatgggggac
cctgcgcgtgaccccatatgctgggcgtgggttcctgaagatggtcgcgtgttggagcag
ggcaaatttggcaacctgggccgcgatgagagccagcgtgaagccttcgtcgagttggtc
aaccgtcgccggcctgatgttattgccgtctgcggttggtcctgcgacactcacaagctt
gttcgtgacatagagagccttgtgagcgaaaaggcgctcatgggtccggaattcgaggac
cccgagacgaatgattaccgaactgagcagctcgaggtcatggttgtggacgatgaggtg
gccagattatacaaagacagccctcgcgccgtcgctgagcatccttcgctcaatcctgtc
accagatactgcgttgctctggcgcgttacatgcagaacccgatgaaggaatatgccgca
ctgggcaaggatgtgatctcgctttcttttcacccttgccagaaattgctaccgcaggac
aagctcgccaaatacctggaatcagcaatggtggacacggtcaatatggtcggtgtgaac
atcaacgacgccatggtcgacacgtacactgcgaacctgcttccctttatcgctggtctt
ggcccccgcaaggcaacaagtgtgatgaaggccatcaatgccaacggtggctcagtgaac
acaagagaggaactagtgggcgaccctgagagccggaagctccctgtggttggtccccgc
gtgtggaacaactgcgccagtttcttgtacattgactatgacgcgacaaaccccgcctcg
gatcctctggacaatactcgtgttcatcctgaagactacgagcttggtcgaaagatggct
gcagatgcgctggaacttgacgaggaagacgtcaaggctgagattgacgagaatggccca
ggtgccattgtacgcaagctgttcaagcagggcgaacaggagagagtcaatgagctggtt
ttggacgagtatgcggatcagctgctgcgcaactttaaccagcgaaagcgtgccactctg
gaggccatcagtgctgaacttcaggcggagtacgaagagctgcgaagaagctttgcgcca
ctgacgcaaacagaaatttttaccattttcaccggtgagaccaagcaaacactttgtgag
ggcatgattgtacctgtcaatattcgcgtggccagggatgactttgccattgccaagctc
gactgtggcattgagggtcgtgcggaggcccacgaagtgacgagtctgccctcggtcaag
gatgtgctcagcgtgggccaaacagcgcgggccaagattctggaaatggactacaaggcg
ttctctgtgaagctttcgatgcgcgaggactcgctccgaattccttacaagcggccaacc
aattacggccgcgacgggtgggactatgctcaagaagcagcagataaggaagagctcaaa
gtgaaggacaagactactggacggacacagcgcgttgtcaaacaccccaacttcaagccg
ttcaatgggctgcaggcagaggaatttctgggatcgcaagcacctggcgaagttatcatc
cgaccatcctccaaaggaaacgaccacctggccattacatggaaggttgcggacaacgtg
taccagcatattgatgtattggagatgcaaaaggaaaatgagttttcggtgggcaagcta
ctgcggattggagggcgatatacgtacagcgacttggacgagttgatcgtggaccacgtc
aaggccatggctcgcaaggtggatgaaatgatgcgtcatgacaagtatcagaatcgctcc
cgcagcgaaactgaaaaatggctcactacatacattgacgcaaaccccaaccggtcggct
tatgctttctgcatcgacacgaagcaccctgggtacttttggctatgcttcaaggccagc
cggacggctatcgtgattggcatcccgatccgagtgattccacaaggattcgaactcaag
ggataccagtaccccgacatgcgtgccctgtgtaatgggtttaagctacggtaccagaat
gagttttctagaatgggggcgagataa
DBGET
integrated database retrieval system
