Cordyceps militaris: CCM_05571
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Entry
CCM_05571 CDS
T03108
Name
(RefSeq) chromodomain helicase (Chd1), putative
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_05571
03036 Chromosome and associated proteins [BR:
cmt03036
]
CCM_05571
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CCM_05571
Chromosome and associated proteins [BR:
cmt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CCM_05571
SLIK complex
CCM_05571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Chromo
Helicase_C
CHD1-like_C
HDA2-3
ResIII
DEAD
Cdh1_DBD_1
CDH1_2_SANT_HL1
AAA_22
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
18167589
NCBI-ProteinID:
XP_006670778
UniProt:
G3JKH4
LinkDB
All DBs
Position
Unknown
AA seq
1657 aa
AA seq
DB search
MSSPALGSPLNGHVTEDDENDSHIPAQRSRTNSEASNRSLTPAHQPSPLGDARGASNGAD
NIFDDDRMSESQESSPDNVSHDADFEMRNDAPSPQDHDDEPRGRASSSDSNQVSKRKASF
DEEDYMRANPELYGLRRSRRPQPQVKLAESDSESDAEPVSRRQTKRRRVDNSHTSSKRAT
PVLQSTNDSDSDSDTYGGARAKSQIKRARQRLEAQPGLALSEKRWSNRRAAQQVQQGAYE
ESDAEEEEDDTEAGQGYYVADYVDDSPYVEKVVKHQIKDGIVLAFDSSRYDFEYFIKWQG
KSNLHDTWETIESLRNVRGFRKVENYFRKVVEYELDVRFGEDVAPEIKEQYFLDRARDEE
AFEDYTKVERVVNVRDGEDGPEYFVKWKGLTYEECTWEVADDINGVFQDKIDQYLDRASR
SWLSDRKETNPDTRSRMKKLDEQPGYIQNGELRPFQLRGLNFLCLNWCRGNNVILADEMG
LGKTVQTVSFLSWLRNCRKQEGPSLVVAPLSVIPAWCDTFNNWSPDLNYVVYLGPEDARS
IIRENELLVDGNPKKPKFNVLVTSYEFILQDWQFLQSIKFQCLAVDEAHRLKNAESQLYM
RLLGFGIPCKVLITGTPIQNNLSELAALLDFLNPGKVKIDEDLESFDANDASEKLQELHS
AIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASSGHKNSL
LNIMMELKKISNHPYMFPGAEERVLAGSVRREDLIKGLVTSSGKMMLLDQLLSKLKKDGH
RVLIFSQMVRMLDILGDYMSLRGYKFQRLDGTIAAGPRRMAINHFNADDSDDFCFLLSTR
AGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKRPVNIYRLVSKETVEEEVLER
ARNKLLLEYLTIQAGVTDDGKAAFKEELNKKGIKVDGPSSNEDIQMVLKMRSSKMFEQSG
NQERLEQLDIDSILENAEVTKTKVDDKINLSSGGIDWDNFMQITDVKVDDINLDWDQIIP
ADKLAEIKAEEEKRLHDDYLAKVAAESAPRRAAIKSRNRESERADRLQKRQREQQQEEEE
ERALRADPKRPLNDKEQRNLIKAYFRFGSMDDRRDDIIREAKLVERDSDFVKSLLDDFVK
AAQTAVDENLNRLAEEEKKIGKTLTKKDRKAVLIDFGDLKKVNAETAIERPKQLQLLRDA
IRSQADWKTYRLPDATKATNYSCSWGAKEDAMLLVGIDRHGFGAWVQIRDDLDLELSEKL
FLDEHRVGKKEERSKANDRLKAPGAVHLVRRSEYLLSVLLAKQSNDRPGPRMGEGHRAKK
QTLSNGHRNSAAASPSGQSVKRPREKERDHDRGTPRPELKRKAGSHEDSRIPKHPRTEDG
RRNSRPDDRGDRHDQSRRRDDDDRDRRREKPRHRDDHRRDDYRREDFRRDERRDDHRDDY
RRDDRRDDRRDDRRDDRRDVRRDGRRDDRRDDRRDDRRDERRDDRRDDRRDDRHTDRHTD
RHADRHAERDRNHRKENPVDERRATALRRLDELREIGDKAEQRDKNNHAMIWYLLKPVRD
NFERILSTTKHKIKSSKERASIFAVELVVIGRFLDEKLPATVADERLKDNFWEFLAALWP
VDDTSKSVTGDRLSNMYKTLYARKKDGSSVRPSTNGA
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccctgccctgggcagtcctctcaatggacatgtaacggaagatgatgaaaac
gactcacatatccccgcacaacgctcccgaaccaatagcgaggcctcgaatcgctccctg
acgccggcgcatcaaccgtcgcctctgggggatgctagaggcgccagcaatggcgcagat
aacatatttgatgacgatcgcatgtcagaaagtcaagaatccagccccgataatgtgtct
catgatgccgacttcgagatgcgtaacgatgccccctcgccccaggaccacgacgacgag
ccgcgtggccgtgcgagctccagcgactcaaatcaagtatccaagcgtaaagcctcgttc
gacgaagaagactatatgagagccaacccagagctttacggcctacgccgtagtcgacgc
ccccaaccccaagtcaagctggccgaatcagattcagaatccgacgctgagcccgttagc
cgccgtcagaccaagaggcgacgcgttgataactctcatacttcatccaagcgagccacc
ccggtcttgcaatcgaccaatgattccgattccgattcagacacatatggcggtgcgaga
gcgaagagccaaattaagcgagctcgacaacggctcgaagctcaaccaggcttggctctc
tcggagaagcgctggtctaacagacgggctgcgcaacaagttcaacaaggagcttatgaa
gagagcgatgccgaggaagaagaagacgacaccgaagctggccaggggtattatgttgcc
gactatgtcgatgactccccgtatgttgaaaaagtcgtcaaacatcaaatcaaagacggt
attgtccttgccttcgactccagccgatacgactttgaatacttcatcaagtggcaaggc
aagtccaacttgcatgacacgtgggaaaccatcgagtctcttcgcaatgtgcgtggcttc
cgcaaagtcgaaaattacttccggaaggtggttgagtatgagctcgacgttcgctttggt
gaagatgtagcacccgaaatcaaagagcaatacttccttgatcgtgctcgtgacgaagaa
gcgttcgaagactacacaaaagttgaacgagtcgtcaatgtccgcgatggagaggacggc
cctgagtactttgtcaaatggaaaggcctcacctatgaggaatgtacttgggaggtagcc
gacgacatcaacggcgtgttccaagacaagattgatcagtatctcgaccgtgcgtcgagg
tcctggttgtccgatcggaaggaaaccaacccggatacccgctctaggatgaaaaagctg
gatgagcaacctggctacatccaaaatggcgagttgcgcccctttcagcttcgcggactc
aacttcctttgcctcaactggtgtagaggcaacaatgtcatccttgccgatgaaatgggc
ctcggaaaaacggtccaaactgtctcgtttcttagctggctgcgcaactgccgcaaacaa
gaagggccttcgctggttgtcgcgcctctcagtgtgatcccagcttggtgcgacacgttc
aataactggtctccggatctgaactatgtcgtttatctaggtcccgaagatgcgcgtagc
atcattcgcgaaaacgagttgcttgtggatggtaacccgaagaagcccaagttcaacgtt
ctcgtcacatcgtatgagttcatccttcaggactggcagtttctccaatcaatcaagttt
caatgtctcgcagtcgatgaggcccatcgtctcaagaatgccgagtctcagctctacatg
cgtttgcttggctttggcatcccctgcaaagtactcattaccggcacacccatccaaaac
aacctttccgaacttgctgccctcctggactttttgaatcctggcaaggtcaagattgac
gaagacctagagtcatttgacgcgaatgatgcctcggaaaaactgcaagaactgcatagt
gccattgctccctacattctacggcggacgaaagaaaccgtggaatccgacctgccccca
aagacggagaagatcattcgcgttgagctctccgatgttcagctggattactacaaaaac
attttgaccagaaactatgctgcgctttccgacgccagcagtggtcacaagaattcattg
ctcaacatcatgatggagctcaagaaaatcagcaaccatccttacatgtttcctggtgct
gaagagcgagtcttggctggtagcgtccgtcgtgaagacctcatcaaaggtctcgtcacc
agtagcggaaagatgatgctactggatcaattgctctccaaactgaagaaggacggtcat
cgcgtgctcatcttcagccagatggttaggatgctcgacattcttggtgactacatgtct
ctccgtggttacaaattccagagattggacggcactattgcggcaggccctagacgaatg
gccatcaaccacttcaacgcagacgatagcgacgacttctgcttcctactttccactcgc
gcaggtggattgggtatcaacctgatgacagcggatactgtcgttatttttgattccgac
tggaacccccaggccgacttgcaggccatggctcgagcacacagaatcggtcaaaagcgc
cctgtcaatatctaccgccttgtctccaaggagaccgtcgaagaggaagtcctggagcgt
gcacgaaacaagctgctgctggaataccttactatccaggcaggtgtcacagatgatggc
aaggctgcattcaaggaagagctcaataagaaaggcatcaaggttgatggaccatcctca
aatgaggacattcaaatggttctcaaaatgcgctcgtccaagatgttcgagcagagcggc
aaccaggagcgccttgagcaactcgatattgactctattctagagaatgcggaagttacc
aagaccaaggtcgatgacaagatcaacctcagcagtggtggcattgactgggataacttc
atgcagattactgatgtcaaagttgacgatattaaccttgactgggaccagattatcccg
gccgacaagttggcagagatcaaagcagaggaagagaagcgtctccacgacgattatctg
gccaaagtcgccgctgagagtgcgccccgacgcgccgctattaaaagccgcaatcgggag
tcggaacgtgccgatcgccttcagaagcgacagcgagaacagcagcaagaagaggaagaa
gaacgggctctccgagctgaccccaagcgacctctgaatgacaaagagcagcgaaacctt
atcaaggcctatttccgcttcggctcaatggatgatcgtcgagatgatatcattcgcgaa
gctaagcttgtcgaacgcgatagcgactttgtcaagtctctcctagacgattttgtcaag
gcggcccaaacagctgttgatgaaaatttgaacagattggccgaagaagagaagaagatt
ggcaagactttgacaaaaaaggacaggaaagctgttttaatcgactttggtgatctaaag
aaggtcaatgctgagacagccatcgaacgaccaaagcagctgcagcttcttcgcgatgcc
atcagaagccaggctgattggaaaacataccgacttcctgacgcaaccaaggctaccaat
tacagctgctcatggggagccaaagaggatgccatgcttctcgttggcatcgacaggcac
ggattcggagcgtgggtacagattcgcgatgatttagatctggagctttcagagaagttg
ttcctggatgagcaccgcgtcggtaagaaggaggagaggtccaaggccaatgacaggctg
aaggcacccggcgcagtgcatcttgtgcgacgttcggagtatttgctgtccgttcttctt
gcaaagcagtctaatgatcgccctgggcctcgcatgggcgagggccaccgggcgaaaaaa
cagacactctccaatggtcatcgcaacagtgctgctgcatctcccagcggccaaagcgtg
aaacgcccacgggagaaggagcgagaccatgatcgcggaaccccccgaccggaactcaag
cgcaaagcgggctcccatgaagattctcgcattcccaagcaccctcggactgaagacggg
cgccgcaacagcagacccgatgacagaggtgatagacatgatcaatctcgacgtcgagat
gatgacgaccgcgaccgacgccgcgagaaaccccgtcacagagatgatcaccgcagagat
gactaccgtcgcgaggattttagacgggacgaacgacgtgatgatcatcgtgacgattac
cggcgcgacgatagacgggacgacagacgggacgacagacgggacgacagacgtgatgtc
agacgtgacggcagacgtgacgaccgacgtgacgaccgacgtgatgaccgacgtgatgag
aggcgcgacgacagacgcgatgataggcgcgatgaccgccacacagaccgccacacagac
cgccacgcagaccgccacgcggagcgcgacagaaaccatcgcaaagagaatcctgtcgat
gagagaagagcaactgcacttcgtcgcctagatgagcttcgcgaaattggcgataaagca
gagcaacgtgacaagaacaatcacgctatgatctggtacctgctcaagcccgtacgagat
aattttgagcggatcctgtcaacaacgaagcataaaatcaagtcgagcaaagaacgcgcg
tcaatctttgcggtagagcttgtggtaattgggagattcctagatgagaagcttccagcc
actgtagcggatgaacgcctgaaagataatttctgggagttcctcgctgctctttggcct
gtcgatgacacaagcaagagtgtaacgggcgatcgactaagcaacatgtacaaaacattg
tacgcgcgcaagaaagatggtagctcagtcaggccgagcacaaatggtgcgtag
DBGET
integrated database retrieval system
