Cordyceps militaris: CCM_05685
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Entry
CCM_05685 CDS
T03108
Name
(RefSeq) nucleoporin NUP49/NSP49
KO
K14307
nucleoporin p58/p45
Organism
cmt
Cordyceps militaris
Pathway
cmt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CCM_05685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_05685
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CCM_05685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
Nup49_C
ATG17_like
MG280
ISG65-75
Sec3_CC
Dynamin-like_hel_bact
SKA1
Motif
Other DBs
NCBI-GeneID:
18167703
NCBI-ProteinID:
XP_006670892
UniProt:
G3JGX1
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MSLARSASGPGGLTINTGAANSLTRATATNHKYLLLTDLAQRCAPHKTSPSANELAVSLP
SSSSAPISQPQSTSGLFASTATNTNSSSATATGAMGLFGTAAAQPKAGGLFGASTTTQAP
AGGGLFGAVSTTAAQPQQGQTTPASGSIFGAAQSQPKPAGGLFGAPAAQPTNTSAASVFG
GGAAATQQPAQASSGIFGAAAAQKPAGTGLFGATATQQPAQAGTGLFGNAQQGGATSNTT
FGQPQANSSAGIFGQSQQPTQAANQVPAVQINYDTLRPRSRFDDLAQPIQDEVALIDKGI
QRVIKMRDAIGEFMPQHEKDLQQLGNDVKFVESKFRTLQEALNRDIQTVKSLQDVTKKNI
GDAQLSFKAADNLKLPSHYHQTGLFAGSAPSTGSNDTDASSAHANAQDLITYFNRICDDV
ERYKKRLDEYRGEIERDMPGVENGLYEQIRSFRDRNAALYGTGGAGGVQDQLNQVLSALR
ETGNAIVGQAGQIADTRERLSRLQAGFIDNGLYANN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcgcgctcagccagtggcccaggcggtctcacaatcaacactggcgctgca
aactccctcacacgcgctactgctacaaaccacaaatatttgctactcaccgacctcgcc
caacgttgcgcgcctcacaaaacatctccatcggctaacgagttggctgtttctttgccg
tcatcatctagcgcacctatatcccaacctcaatcgaccagcggtcttttcgcatcgaca
gccacaaacacaaactcgagctccgcgaccgcgaccggcgccatggggctctttggcacg
gcggcagcgcagccaaaggcgggcggcctgtttggggcatcaacaaccacacaagcaccg
gcgggcggcgggctctttggcgccgtcagcacgacagcggcccagccgcagcaaggacag
acaacgccagcctcgggcagtatctttggtgctgcgcagtcgcagccaaagcctgctggg
ggtctgtttggagcaccggctgcgcaacccacaaacacatcagctgcaagcgtctttggc
ggtggtgctgcggcgacgcagcagcctgctcaagcaagttcgggcatctttggtgctgca
gcggcacagaagccggcgggcacgggactctttggcgcgacggcgacgcagcagcctgct
caggcgggcacgggactatttggaaatgcacagcaagggggagctacatcaaatactacc
tttggccagccacaggcaaactcgtctgctggaatctttggccaaagtcaacagccgacg
caagcagccaaccaggtcccggcagtccagatcaactatgataccttgcgcccgcggtcc
cgattcgacgacctggcccaaccgattcaagatgaagtggccctcatagacaagggcatc
cagcgcgtcatcaagatgcgggacgcgattggcgagtttatgccccagcacgaaaaggac
cttcagcagctcggcaacgacgtcaagtttgtcgagtccaaattccgcacgttgcaagaa
gccctcaaccgcgacatacagaccgtcaagagcctgcaagacgtgaccaagaagaacatt
ggcgacgcgcagctatcattcaaagccgcggacaatctcaagctccctagccactaccat
caaaccggcctctttgccggctccgccccgtcgaccggctcaaacgacacggacgcgtct
tcggcgcacgccaacgcccaggacctcatcacatactttaaccgcatctgcgacgacgtg
gagcggtacaagaagcggctagacgagtaccgcggcgagattgagcgcgacatgccgggc
gtcgagaatgggctgtacgagcagattcgcagcttccgagaccgcaacgccgcgctctac
ggcaccggcggcgccggcggtgtccaggaccagctcaaccaggtgctctctgcgctcagg
gaaacgggaaatgccattgtcggccaggccggtcagattgcggacacgcgcgagcgctta
tcgcgcctccaggccgggttcattgataacggtctctatgcgaacaattaa
DBGET
integrated database retrieval system