Cordyceps militaris: CCM_05686
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Entry
CCM_05686 CDS
T03108
Name
(RefSeq) Fip1 like protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cmt
Cordyceps militaris
Pathway
cmt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CCM_05686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_05686
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CCM_05686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
18167704
NCBI-ProteinID:
XP_006670893
UniProt:
G3JGX2
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MEMDEDDDIYVPEEPQVDSHQAQPPPVARPVEELEEGEEEDESGAMDEEDDDSDIDIITE
RKDGTTAAPPTQAKYSDIRNIPQRSGTNDSPGKPAPVVPAKPEAQTAPSSTLNVAAPSAD
QTSAAASKSTVDINANPVYAQVGKPITQVNIDEDLPDNEKPWRKPGTDISDYFNYGFDEF
TWALYAAKQETVRGEFGADAFAVNNKKMMDDFNNMMMGGMGGMGMNGGANNNAGASSMPG
GDGGMAPEMQQMMQQMMAAGMDPSQMDMSQMNAMFSGMQNGGGGAAGTAQGGAGQNFAGG
YGGNQGAYGGYNQGAGRGRRGRW
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggacgaggacgacgacatctacgtgcccgaggagccacaggttgattcccac
caggctcaaccgcctccggtagccaggcctgtggaggagcttgaggaaggcgaagaggag
gacgagagtggcgcaatggatgaagaagatgacgattctgacatcgacatcatcacagaa
cgaaaagacggcacaacagctgcgcctccaacacaagcaaaatatagcgacatccggaac
ataccgcagaggtcaggcaccaacgacagtccaggaaaacctgcgcctgtagtaccagcc
aagcccgaagcgcaaaccgcaccctcgagtacacttaatgttgctgctccaagcgcagat
caaacttcagcagcagcctcaaaatcgacggtcgatatcaatgccaaccccgtatacgcc
caagtaggcaagccgataacacaggtcaacattgacgaagacttaccagacaatgaaaaa
ccatggcgcaagcccggaacagacatcagcgactacttcaactacggctttgacgaattt
acgtgggcgctgtatgccgccaaacaagagactgtccgtggcgaattcggggccgacgcg
tttgccgtcaacaacaagaagatgatggatgatttcaacaacatgatgatgggggggatg
ggcggcatgggcatgaatggtggcgccaataacaacgctggcgcgtcgtccatgccgggc
ggggacggcggcatggcccctgagatgcagcaaatgatgcagcaaatgatggccgctggc
atggacccgtcacagatggacatgagtcagatgaatgccatgttttcaggcatgcagaat
ggcggcggcggtgctgcgggcacagcacagggcggcgctggacagaactttgcgggtggc
tacggaggcaaccagggcgcgtacggaggctacaatcaaggcgctggtcgtgggagacga
gggagatggtag
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