Cordyceps militaris: CCM_05957
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Entry
CCM_05957 CDS
T03108
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6, putative
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cmt
Cordyceps militaris
Pathway
cmt03018
RNA degradation
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_05957
09123 Folding, sorting and degradation
03018 RNA degradation
CCM_05957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_05957
03041 Spliceosome [BR:
cmt03041
]
CCM_05957
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CCM_05957
mRNA degradation factors
5'-3' decay
Lsm complex
CCM_05957
Spliceosome [BR:
cmt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CCM_05957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
18167975
NCBI-ProteinID:
XP_006671164
UniProt:
G3JHZ7
LinkDB
All DBs
Position
Unknown
AA seq
81 aa
AA seq
DB search
MENGAQGEGKDPSSFLSDIIGNPVIVKLNSGVVYKGELQSVDGYMNIALEKTQEFVNGVK
RKEYGDAFVRGNNVMYISADL
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggcgcacagggcgagggcaaagacccctccagcttcctcagcgacatcatc
ggcaaccccgtcattgtcaagctcaactcgggcgtcgtatacaaaggagaactccagtct
gtggatggctacatgaacattgcactagagaagacacaagaattcgtcaacggtgttaag
aggaaagaatatggcgatgcgttcgtgcgcggaaataatgtcatgtatatttctgcagat
ttatga
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integrated database retrieval system
