Cordyceps militaris: CCM_06035
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Entry
CCM_06035 CDS
T03108
Name
(RefSeq) transcription initiation protein spt5
KO
K15172
transcription elongation factor SPT5
Organism
cmt
Cordyceps militaris
Pathway
cmt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CCM_06035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_06035
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_06035
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CCM_06035
RNA polymerase I system
CCM_06035
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CCM_06035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
Spt5_N
CTD
KOWx_SPT5
KOW5_SPT5
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
KOW
DUF3912
Motif
Other DBs
NCBI-GeneID:
18168052
NCBI-ProteinID:
XP_006671241
UniProt:
G3JIC7
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MASNDPRLDDSSDEEDFNPAPADLSDEEPEKRRKTPVRDDDEDEDDNTSPARPKPVDDDE
EEEEDEDDGPKGKNDDDDEEEEEDEDDEDDVQRGHRRKRRRDRRNAFLDIEAEVDDEDEA
EDDEKEDEEIGDFIDNEHPDDLADTARLNDDRRHRELDRRRDMESSLDAEKQAELYRQRY
AKYRSGKGAGESAVVPKRLLLPSVDDPGIWAVRCKEGKEREVVFSIMKRIEERMGSKGEL
AITAAFERGGTHSVMKGIVYIEAQRQTDILVALDGVLNVYPRTKMTLVDIKDMPELLRVT
KTATLQPGAWCRMRRPIKHNGDLAQVLAVTENGLEARVRFIPRLDYGVRDDNMTQDGKRK
RAFGAGPKPPQRLFSEVEARKRHPRYIQGNPTTNTWTYMGDEFENGFQVKDVKIQQLILT
DVNPTLEEVTRFASGAEDGTENLDLKALAASLKDSNTKVTYLPGDVIEVYSGEQKGVVGK
ATNVQGDIVTMTVTEGDLAGQTIEVPIKGLRKRFKVGDHVKVIGGSRFQDEVGTVVKISE
DKVTLLTDQTNNEVTVFSKDLREASDIGGQGSLGQYELHDLVQLDMTTVGCVVKVDRDSM
VVLDQFGDTRQVMPSQISNKIPKRKQAVAADREGSEIRLDDVVKEYTGQQRQGKIIHIHR
SYVFLHTNDTNENAGVFVTKSSLVNTVAAKGGRVNAATSGPDLSSMNPALKIHKNGSENK
PITPVKMFGRDKAINQTVIIKKGAYKGLLGIVKDSTDTHCRVELHTKSKIITVPRDSLNF
KDKTSGASIDINGRGRGAPGGGRGDRMPSWQGGSRTPAPGGVSDRVPAWGSRTPMATGGR
TPAWKGQDYSGSRTPAWADGSRTVNPYDGSRTAYGSGSRTPAWQSGARTPAPGDAFGAGS
RTPAYTGGDSWNSGSKTPAWGTSAPTPGASGNDSWGYTPGASAGAYDAPTPGGPLGAPTP
GAFAAPTPGAYSAPTPAASAPTPGAGWQGGWGADSAPTPAAGAPTPAASGYYGAPTPAAP
PETPGASGPRYVEDDD
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaacgaccctcggctcgatgactcgtcggacgaggaggacttcaaccctgct
cccgctgacctctctgatgaggagccagagaaacgtcgcaaaacccccgttcgcgatgac
gatgaagatgaagatgacaacacgtcgccggcgcgcccgaaacccgtagatgatgatgag
gaagaggaggaggatgaagacgatggtcccaagggcaagaacgacgatgacgatgaagaa
gaggaggaagacgaggatgatgaagacgacgtgcaaaggggtcatcgcagaaagcgccgt
cgcgaccgccgtaacgctttcctcgatatcgaagctgaagtagatgacgaagatgaggct
gaggacgacgaaaaggaggatgaagaaattggcgacttcatcgacaatgagcatcccgac
gaccttgccgataccgcccgcctcaacgatgatcgtcgccaccgagagctcgatcgccgt
cgcgacatggagtcgagcttggacgccgaaaagcaagccgagctctaccgacagcgctat
gccaagtaccgctctggaaagggcgctggcgaatccgctgttgttcccaagcgcctgctt
ctccccagcgttgatgatcccggtatttgggcagtgcgatgcaaggaaggcaaggagcgc
gaggttgtcttttccatcatgaagcgcatcgaggagcgcatgggtagcaagggcgaactc
gccattacggctgcctttgaacgcggtggcacacactctgtcatgaagggcattgtctac
atcgaggcccaacgccagactgatattctcgtcgctctcgacggtgtcctgaacgtttac
ccgcgaaccaagatgacgctcgtcgacatcaaggacatgcctgagcttctgcgcgtaacg
aagacggccactctgcagcccggcgcgtggtgccgaatgcgccgccccatcaagcacaat
ggcgatcttgcccaggtcctggctgtgacagaaaatggcctagaagctcgagtccgtttc
atcccacgacttgattacggcgtgcgcgatgacaatatgacgcaagacggaaagagaaag
cgagcattcggagctggccctaagcccccgcaacgcctcttcagcgaagttgaggcccgc
aagcgccaccctcgctatattcagggtaatccgacgacaaacacatggacctacatgggt
gacgagtttgagaacggattccaggtcaaggacgtcaagattcagcaactgattcttacc
gacgtgaatcctacactcgaagaagtgacgcggtttgcctctggcgctgaagacggtacg
gagaacctcgacttgaaggcgctcgcggccagtctcaaagacagcaacacgaaggttacg
tacctgcctggcgatgtcattgaagtctactcgggcgaacagaaaggcgttgtcggcaag
gcaaccaatgtgcagggtgatattgtcaccatgactgtaactgaaggtgacctggcgggc
caaacgatcgaggttccaatcaagggcttgcgcaagcgcttcaaggttggtgaccacgtc
aaggtgattggtggtagcagattccaggacgaagtcggaactgtggtcaaaatttccgag
gacaaagtgactctattgacggatcaaaccaacaacgaagtgactgtcttcagcaaggat
cttcgtgaggcaagtgacattggtggacagggctccctgggccaatacgaactgcatgat
cttgttcagctggacatgaccactgtgggttgcgttgtcaaggtggatcgcgattccatg
gtcgtgctggaccagtttggtgacacgcgacaggtcatgccctcgcagatctccaacaag
attcccaagagaaagcaggccgttgctgctgaccgtgaaggatccgagattcggctcgac
gatgttgtcaaggagtacacgggacagcagagacaaggaaagattattcacattcaccgt
tcatacgtctttttgcacaccaacgacacgaatgagaatgcgggtgtctttgtgaccaag
tctagcttggtcaacactgtggccgccaaggggggtcgtgtcaacgctgccacctcaggc
cctgatctaagctccatgaaccctgcgctcaagattcacaagaacgggtccgaaaacaag
cccatcacccctgtcaagatgtttggtcgcgacaaggctatcaaccagactgttatcatc
aagaagggtgcctacaagggactgctgggtattgtcaaggactccacagacacgcattgc
cgtgttgagctgcacaccaagagcaagattattacggtgccgcgagactcgctcaacttc
aaggacaagacgagcggcgcctccatcgacatcaatggcagaggccgcggcgcaccggga
ggcggtcgtggcgatagaatgccgagctggcaaggaggctctcgcacaccagctcctggc
ggtgtcagcgaccgcgttcctgcgtggggttcgcgcacaccaatggcgacgggtggccgg
acacctgcctggaagggccaggactactctggctcacgcacgcctgcgtgggctgatggg
tccagaacagtcaacccctacgatggcagccgcacggcctatggctctggctctcgcacg
cccgcctggcagtctggcgccagaacaccggctccgggtgacgctttcggtgccggttcg
cggactcctgcctacactggcggcgacagctggaactcgggctccaagacgcctgcatgg
ggcacatcggctcccacacccggcgcgagtggcaacgactcgtggggctacacgcccgga
gccagcgctggtgcctatgacgcgcctacgcctggcggccctctcggtgctcccacccca
ggggcctttgcagccccgacgccgggtgcctattcggcgccaacgccggcagcgagtgct
cccacgcccggcgcgggatggcagggcggctggggcgccgactctgcgcctacgccggcg
gcaggggctccaacgcctgcagcgagtggctactacggtgctcccacgccggcggcgcct
cccgagacgcctggcgccagtggtccacgctatgtggaggacgatgattga
DBGET
integrated database retrieval system
