Cordyceps militaris: CCM_06095
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Entry
CCM_06095 CDS
T03108
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
cmt
Cordyceps militaris
Pathway
cmt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CCM_06095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_06095
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CCM_06095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
18168110
NCBI-ProteinID:
XP_006671299
UniProt:
G3JIN8
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MAGDNTSAARTPARQPAKAAVSVSSSAKQKSIMSFFQKSSPAATPSPAARKQVSSDPSSC
LKETKANFLPKAKPAQKLQTPVPSSDAPEPSSSQENLDTVSRHENAPSSPIMARQAKPKP
RPAIKDPAGSSPARKSRKAVSYAESSEDDEPVSTVNRRRTRARLVVDDEDNYGDDGDADV
QDDEDDIDDFVVEDDSDGATPRPKKRKRPSQPTTARKRSNISPPATKDELSDLNDDDVMT
DIPPPTSAKQWSFDPESEEKRPVTTPAERAAKDPKRKEKAHTKEPDERYSWLSKIRDKEK
REPGDPDYDPRTIFIPPLAWNNFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYENDATIG
HQEFDFKMTDRVNMRMVGVPESVLDHWVNQFIAKQYKVARVDQMETNLGKEMRERQDKTG
KKADKIISRQLACVLTAGTLVDGSMLQDDMAAHCVAIKESVVDGLPVFGIAFVDTATGRF
FLTEFVDDVDLTKFETFIAQIGPREMLLEKSHLSTKANRVLKNNTSPTTIWTHLKHGVEF
WDADTCRRELTAANYFSTEADSDGGWPEALEKQRDNDVLMSAVGALVWYLRFLKVERPLL
SQSNFSMYNPIQKNGTLVLDGQTLINLEIFSNSVNGGSDGTLFQLLNKCITPFGKRLFRQ
WVAHPLQNIDRINERLDAVDMLNNDPSVREQFASQLVKMPDLERLISRIHACACKPEDFV
RVLDGFEQIEYTMTLVSSFKGGNGLLDRLIASMPSLEEPLAYWRNAFDRRKAKDEKILIP
ERGIEEDFDASLERMENIKSQLQELLTEKKGELKCKALKFTDVGKEIFQIEAPKAIKVPS
SWRQMSATKDVKRWYFTELTSLVRELQEAEETHSQLVREVAARFCKKFDVDYELWLSAIQ
AIAQLDCLVSLAKASSCLGEPSCRPQFVDQDRSLVEFEELRHPCMLNTTGDFIPNDIKLG
GEQANINLLTGANAAGKSTVLRMSCIAVIMAQIGCYVPAVSAKLTPVDRIMSRLGANDNI
FAAQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCVG
FFATHYHSLATEFENHPEIRARRMQIHVDDAERRITFLYKLEDGVAEGSFGMHCAAMCGI
SNTVIERAEVAAKEWEHTSRLKDSLDKAKTGCYIPLGILSDVGSLLGDRGGVDEKGIEVL
LRAIECL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgacaacaccagtgctgcgcgcactccggcgcgacagccggcaaaggctgcg
gtatcagtttcttcctctgccaagcaaaagtcaatcatgtcgttttttcaaaagtcttcg
ccggctgcgaccccctccccagcggcacgcaaacaggtctcctctgatcccagttcttgt
ctaaaggagacaaaggccaacttcttaccaaaggcgaagcctgcgcagaaactccaaacc
cctgtgccttcgagcgacgcgccagaacccagcagctcgcaggagaacctcgacactgtt
tctcgccacgagaatgcccccagttctccaatcatggctaggcaggcaaagcccaagccg
cgaccagccatcaaagacccagctggcagcagccccgcgcggaagtcgcgaaaagccgtc
agctacgcggaatcctccgaagacgacgaacctgtgtcgactgttaaccgccgtcgcact
agggcgcgactggttgtagacgacgaggacaactacggagatgatggtgatgctgacgtg
caagacgatgaagacgatattgacgactttgttgtcgaggacgattcggacggcgctact
ccaagacccaagaagagaaagcggccatcgcaaccgacaacggccaggaaacgatcgaac
atttcaccacccgcaaccaaggatgagctgagcgacctgaatgacgacgatgttatgacg
gatatcccgccacctactagtgctaagcaatggagctttgaccctgaatcagaagagaaa
agacctgtcactactccagctgagcgtgctgcaaaagacccgaagcggaaagaaaaggct
cacacaaaggaacccgacgaacgctactcctggctttctaagatcagagacaaggagaag
cgcgaaccaggggacccagactatgatccacgaactatctttatccctcctctcgcttgg
aataacttctcccctttcgagaagcagtattgggagattaagcaaaatctctgggacacg
atagtcttcttcaaaaagggaaaattctacgagctatatgaaaacgatgctaccatcggc
caccaagaattcgatttcaaaatgactgatcgcgtcaacatgcgcatggtcggagttcca
gagagtgttcttgaccactgggttaaccaattcattgccaagcaatacaaagttgcccga
gtggaccagatggaaacaaatctcggcaaggaaatgcgtgaaagacaggacaagactggg
aagaaggccgacaagattatttctcgtcaacttgcttgtgtcctcaccgccgggacattg
gttgacggaagcatgctccaagacgacatggctgcccactgtgttgctattaaagagtct
gttgtggacggcctccctgtatttggcatcgcctttgtcgatacagctactggtcgcttc
ttcctgactgagttcgtcgatgatgttgacttgactaagtttgagaccttcattgcgcaa
atcggcccacgagagatgctactcgagaaatctcatctgtcgaccaaggccaacagagtt
ctgaagaacaataccagccctaccacaatctggacgcacctgaagcacggcgtggaattc
tgggatgccgacacctgcagacgcgagttgactgctgcgaactacttctcaacggaagcc
gacagcgatggagggtggccagaagctctggagaaacaaagagacaatgatgtcctcatg
tcagcagttggcgccctggtgtggtatttgcgctttctgaaggtggagcgacccttactt
tcccagagcaacttttccatgtacaatcccattcagaagaatggcaccctcgtcctcgac
ggccagactttgatcaacctcgaaatcttctccaactcggttaatggcggcagcgacggc
accctgttccagcttcttaacaagtgcatcacgcccttcggcaaacgccttttccgacaa
tgggttgcccacccgcttcaaaacattgatagaatcaatgagcgcttagatgcagtggac
atgctcaacaatgatccgtctgttcgtgagcaatttgcctcccagctcgtcaagatgccc
gatctggagcgtcttatttcgcgaatccatgcctgcgcttgcaaaccagaagactttgtt
cgtgttctggatgggtttgagcagattgagtacacaatgactctggtctcctctttcaaa
ggtggtaatggcttgcttgatcgtcttattgcatccatgcccagccttgaggagcccctg
gcctactggagaaacgcttttgatagacgaaaggccaaggatgaaaagattctcatcccg
gagcgtggtattgaggaagattttgatgccagtttggagcgaatggaaaacatcaaaagc
cagcttcaagaactgctaacagagaagaagggggagctcaagtgcaaggcgctcaagttc
accgacgtgggtaaagaaatcttccaaatcgaggcgccaaaggcgatcaaagtaccctcc
agctggcgacagatgtctgctaccaaagacgtcaagcgatggtattttaccgagctgacg
agtctcgtccgtgagctgcaagaagcggaggagactcactcgcagttggtgcgcgaggtt
gcagcgcgcttctgcaaaaagtttgacgtcgactacgagctctggctttcagctattcag
gccattgcccagctggactgcttggttagtctggccaaggcatcatcgtgcttgggcgag
ccaagctgccgtccgcaatttgtagatcaagaccgaagcctcgtcgagtttgaggagctg
cgccatccatgtatgctgaacacgactggcgactttattcccaacgacatcaagctcggc
ggcgaacaagccaacattaatctgctcaccggtgccaacgctgcaggcaaatcaacggtt
ctaagaatgtcttgcattgccgttatcatggcgcaaattggctgctacgtaccagccgtg
tctgcaaagctcacacccgtggacaggatcatgtcccgcctcggtgccaacgacaacatt
tttgctgcgcagtcgactttctttgtcgaactgtcagagaccaagaagattctcgccgag
gcgactccccgctctctcgtcatcctcgacgagctgggccgcggcacaagttcgtatgat
ggtgtagcagtcgctcaagccgtcttgcaccatgtagcgacgcacattggctgtgtcggc
ttcttcgccacgcattaccactcgctggccaccgagtttgagaaccaccccgagattcga
gcccggcgcatgcagatccacgtcgatgatgcggagcgccgcatcacctttttgtacaaa
ctagaggatggcgtcgcagaaggcagcttcggcatgcactgcgcggccatgtgcggcatc
tccaacaccgtcattgagcgcgccgaggtggcggccaaggagtgggagcacacgagcagg
ctcaaggactccctggacaaggcaaagacgggatgctacattccgctcggcatcctcagc
gatgtcggcagcctgcttggtgacaggggcggtgttgatgaaaagggtattgaggttttg
ttgcgtgctattgagtgcctgtag
DBGET
integrated database retrieval system
