Cordyceps militaris: CCM_06190
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Entry
CCM_06190 CDS
T03108
Name
(RefSeq) PWI domain mRNA processing protein, putative
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cmt
Cordyceps militaris
Pathway
cmt03013
Nucleocytoplasmic transport
cmt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CCM_06190
03015 mRNA surveillance pathway
CCM_06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_06190
03041 Spliceosome [BR:
cmt03041
]
CCM_06190
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CCM_06190
Spliceosome [BR:
cmt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
CCM_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Activator-TraM
Motif
Other DBs
NCBI-GeneID:
18168205
NCBI-ProteinID:
XP_006671394
UniProt:
G3JJ88
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MASRTDARLLKATKFPPEFNKKVDMQKVNLGVMKKWIASRISEILGNEDDVVIEMCFNLV
DGPRNPDIKALQIQLTGFLDKDTASFCKELWKLFLSAQDSPQGVPKELLEAKKLELMQEK
VESAETNPSDATATYCLPTIGTEETDREIGRIIDRDAGVTVASTIAEPTIAEPTVAQSKV
VEALDLRRDRVLLRRGETADNGAHTTATAMYHEDGMDHSVDEMDHSVEEMDHSVVEMDHS
GDETADRSAPHPLRLLDLALRRAAARALHPDAETRPDAETHPDVVLRYESDQGLDPAHPN
ATRIVLADLETEANHLLPKGRGRTQEAGPGPQRQPEPEPEPEPKSKPDQGAEE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagaactgatgcgcggctgttgaaggcaactaaattcccaccggagtttaac
aagaaggtggatatgcaaaaagtgaacctaggcgtcatgaagaaatggattgccagccgc
atttccgagattcttggcaacgaggatgatgttgtcatcgaaatgtgcttcaacctggtc
gacggacctagaaaccccgatatcaaagccctccagatccaacttaccgggttcctcgat
aaagacacggcgtcattctgcaaagaattatggaagctattcctcagcgcccaagacagc
ccacaaggcgtcccgaaagagctgctagaggcaaagaagctcgagctcatgcaagaaaag
gtggaaagcgccgagacgaacccgagcgacgcgaccgcaacatactgccttccaacgatc
gggacagaagagacggaccgagagatcgggcggataatcgaccgggacgctggggtgacc
gtggcgtcgacaatcgcggagccaaccatcgcggagccgacagtcgcccagtcgaaagtc
gtggaggccctagacctgcgcagagatcgcgttctcctgaggcgcggggaaaccgcggac
aacggagctcatacaacggcgacagctatgtaccacgaggacgggatggaccacagcgtg
gacgagatggaccacagcgtggaagagatggaccacagcgtggtcgagatggaccacagc
ggggacgagaccgccgatcgcagcgctccccatccgcttcgtcttctagatctagctctt
cgtcgcgcagccgctcgcgctctccaccccgacgccgagactcgacccgacgccgagact
caccccgacgtggtactacgctacgaaagcgatcaaggtctcgatcccgctcaccccaac
gcgacacggatcgttctcgccgacttggagacggaagcaaatcacctgctgccaaaaggg
cgcggcaggacccaagaagcaggtcccggaccgcagcggcagccggagccggagccggag
ccggagccgaagtcgaagccggaccagggcgcggaagagtag
DBGET
integrated database retrieval system
