Cordyceps militaris: CCM_06316
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Entry
CCM_06316 CDS
T03108
Name
(RefSeq) fms interacting protein, putative
KO
K13174
THO complex subunit 5
Organism
cmt
Cordyceps militaris
Pathway
cmt03013
Nucleocytoplasmic transport
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_06316
09122 Translation
03013 Nucleocytoplasmic transport
CCM_06316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_06316
03041 Spliceosome [BR:
cmt03041
]
CCM_06316
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CCM_06316
Spliceosome [BR:
cmt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CCM_06316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
SPATA1_C
KIF21A
Casc1_N
Motif
Other DBs
NCBI-GeneID:
18168330
NCBI-ProteinID:
XP_006671519
UniProt:
G3JK25
LinkDB
All DBs
Position
Unknown
AA seq
206 aa
AA seq
DB search
MTVDRIISDPSLAAVLQVSDQARDQARDLLQLIGAPATPENSVEVAKQQKRLLTSISHLR
GLHRNASFAARDTKAQTAERRHDVDRLHLQLQNLYYEQRHLQDEIVACESYDHKYQQLPL
IPVEEFLAQNQDHATDDENELMFARIEHERAEREGLEQRRQELLKRKQKLIAENTRRKED
LANLDQNLEKFIDAAKPILQLFEKAP
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcgatagaatcatcagtgaccccagcctcgccgccgtgctgcaggtgtcggac
caggcacgcgaccaggcccgcgacctgctgcagctcatcggcgcgcccgcgacgcccgag
aacagcgtcgaggtggccaagcagcagaaacgtcttcttacgagcatctcgcacctgcgc
ggcctccatcgcaacgcctcgtttgccgcgcgtgacaccaaggcgcagacggccgagcgc
cgccacgacgtcgaccgcctgcacctgcagctgcagaacctgtattatgagcagcgccat
ctccaggacgagattgtggcctgcgaatcctacgatcataaataccagcaactgccgttg
attccagtcgaagagttcctcgcgcagaaccaggaccacgcaactgatgacgagaatgag
ctcatgtttgcgagaatcgagcacgagcgagcggaacgcgagggcttggagcagcgccgc
caagaacttctcaagagaaagcaaaagctaattgctgaaaacacgcgccgcaaggaggat
cttgccaatttggaccagaatttggagaagtttattgacgctgccaaacccatactgcaa
cttttcgaaaaggctccatga
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