Cordyceps militaris: CCM_06502
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Entry
CCM_06502 CDS
T03108
Name
(RefSeq) nonsense-mediated mRNA decay protein (Nmd5), putative
KO
K20223
importin-7
Organism
cmt
Cordyceps militaris
Pathway
cmt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CCM_06502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmt03009
]
CCM_06502
Ribosome biogenesis [BR:
cmt03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CCM_06502
Pre-60S particles
CCM_06502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBN_N
Cse1
Xpo1
TPR_IPO5
TPR_IPO11
CAS_CSE1
MOR2-PAG1_C
GRIP
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
18168516
NCBI-ProteinID:
XP_006671706
UniProt:
G3JMP6
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MDTAAIRGLLAASLLPDADNRRHAELQLKQIEEEVGFLVCLLDILEAEQDASVRLSTIIY
LKNRVNRSWYTTEPVAAGKLIPDEEKDRIRDRLVPLLATSEPLVRQQLIPVIQRVLQADF
PNRWPSFMNFTSELLNTNNTSSVLAGLQCLLAICRAFRFKSTNSEDRQHFDGIVDASFPR
LLAICNELVNQESDEAGEMLHLALKTYKHATWLELAPALRVPETNIAWCTVFLQTVAKAA
PASAMHEEPTERELHHWWKAKKWAYFNLNRLFIRHGNPAVPGKESDAIAFAKNFIANIAP
EILKHYLHEIEKWVAKTSWLSRPCLSYTLIFLDEAVGPKEMWPHLKPHLTNLVTHFVFPV
LCLTEDDLEKFEEEPEEYLHRKLTYFEEASAPDVAATNFLVNLTKQRRKETFEILKFVNA
VVNEYEEAAPEAKNHVAKEGALRMIGTLAPVILGKKSPIADQIEYFLVRYVFPDFKSPQG
YLRARACDTIEKFEQLDFQNQNNLLTIYRHILDGMADEALPVRITAALALQPLIRHDVIR
QHMKQSIPTIMQQLLKLANEADIDALANVMEDFVEVFATELTPFAVALCEQLRDTYLRIV
RELLEKESRAGEDDELYIAYDDKSITALGVLQTIGTLVLTLESTPDVLLHIEAVLMPVIK
VTLENKLYGMFPTMDSKTHTNLADLYNEAFEIIDSCTFTAKAISPNMWQAFELIHTTFKS
GAEFYLEDMLPALDNFVQYGAPQLAQKPEYVRALYEMVSDMFTDPRQGGVERICACKLAE
ALMLSLHGNIDQYIEGFISMAMTVLSAQPDVKPKSYKIYLVEMIINCIHYNPLLSLQILE
AKGWTNRFFSLWFGSMSSFSRVHDKKLCIVAISALLNLNHEQVPPSVAVGWPRLLQGITE
LFRTLPAALKNREEALRDDPYFSTNYTYDDDDEWDEDESKWEAEEEAEPVVEEEAAEAKE
ESNAYLEFLHGEAQKFSRAIDDDEEDELREDSVLLESPLDKVEPYQLFRGTLLKMQQEQP
EFYSSLAGQLSPEDQSVLQSIIAKAETIAAQQAQQPPNGGAN
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggacactgccgccatcaggggcttgctcgccgcgagtctgcttcccgatgcggacaac
agacgtcatgctgagcttcaactcaagcagatcgaagaagaggtcggcttcctcgtctgc
ctcctcgacatcctcgaggcggaacaagatgctagtgtgcgtctatccacaatcatctat
ctcaagaaccgcgtcaatcgatcatggtacaccaccgagcccgtcgccgccggcaaattg
atacccgatgaggaaaaggatcgcattcgagaccgcctcgtccctctgctcgccacctcc
gaacccctcgtccgccaacagctcatccccgtcatccagcgcgtcctccaggccgatttc
cccaaccggtggcccagctttatgaacttcacctcggagctcctcaacaccaacaatacc
tcctccgtcctcgccggcctccagtgcttgctcgccatctgccgtgcgttccgcttcaag
tccaccaatagcgaagacagacagcattttgacggcatcgtcgatgccagcttcccccgc
ctgctagccatttgcaacgagcttgtcaaccaggagagcgacgaggctggtgagatgctt
cacctggccctcaagacgtacaagcacgcgacatggctcgagctcgcacccgccctccgc
gttcccgaaaccaacattgcctggtgcaccgttttcctccagacagttgccaaggctgct
cctgctagcgccatgcacgaggaaccaaccgagcgcgaacttcatcactggtggaaggcc
aagaaatgggcttactttaacttgaaccgtttgtttattcgacacggcaaccccgcggtc
ccaggcaaggagagcgacgccattgcctttgcaaagaacttcatcgccaacattgccccc
gagatcctcaagcattacctccacgagattgagaagtgggtggccaagacctcctggctt
agccgaccctgtctttcctacactctcatcttcctcgacgaggctgtcggccccaaggag
atgtggccgcacctcaagccgcacctgacaaacctcgtcacccacttcgtcttccctgtc
ctttgcctgaccgaagacgatctcgagaaattcgaagaagaacccgaagagtacctgcat
cggaaactcacgtactttgaggaagcctccgcccctgacgtggccgcaaccaacttcctt
gtcaacctcaccaagcagcgccgcaaggagacctttgagattctcaaatttgtcaacgct
gtcgtcaacgagtacgaggaagctgctcccgaagccaagaatcacgtcgccaaagaaggt
gccctgcgcatgataggcactcttgctcccgtcattctcggcaaaaagagccccatcgcc
gaccagattgaatacttcctcgtccgatacgtcttccccgacttcaagagcccccagggt
tacctccgtgcccgtgcttgcgataccattgaaaagtttgagcagctcgacttccagaat
cagaacaacctgctcaccatttatcgccacatcctcgacggcatggctgatgaagccctc
cccgttcgtatcaccgctgctctcgctctgcagcccctcatccgccacgacgttattcgc
cagcatatgaagcagagcattcccaccatcatgcaacaactcttgaagctcgccaacgag
gccgatatcgatgcgctcgccaatgtcatggaggactttgtcgaggtctttgccactgaa
ttgactccatttgctgttgctctgtgcgaacaactcagagacacatatctgcgaattgtt
cgcgagctccttgagaaggaaagcagggctggcgaggatgacgaactatacattgcctac
gatgataagagcatcactgctctcggcgtactgcagactattggaacccttgttctgact
cttgaaagcacccccgatgttcttctccacattgaggctgtcctcatgcctgtcattaag
gtgactctcgagaacaagctctacggtatgtttcccacgatggattccaaaacccacact
aacttggcagacctgtacaacgaggctttcgaaatcattgacagctgcacctttactgcc
aaggccatctcccctaacatgtggcaagcctttgagctcattcatacaaccttcaagtct
ggtgccgaattctacctcgaagatatgctacctgctctagacaactttgtccagtatggt
gccccacagctggcccagaaacccgaatacgtccgggctctctatgagatggtctcggac
atgttcactgatccacgccagggtggtgttgagagaatatgcgcctgcaaattggccgag
gctctcatgctcagtcttcacggaaacattgaccagtacattgagggcttcatttccatg
gccatgaccgtcctgtctgctcaacctgacgtcaagcccaagagctataagatttacctt
gttgagatgatcatcaactgcatccactataaccctcttctcagcctccagattctcgag
gccaaaggctggacaaaccgcttcttcagcctgtggttcggcagcatgtcttccttcagc
cgtgttcacgacaagaagctctgcattgtcgccatttcggcccttctcaatcttaaccac
gagcaggttcctccaagtgttgctgttggctggccgcgtctgcttcagggcatcacggag
ctcttccgcactttacccgccgctctcaaaaatcgtgaagaagctctccgcgatgacccc
tatttctctaccaactatacctatgatgatgacgacgagtgggatgaggacgaatccaag
tgggaggccgaggaagaggcagagccagtcgtcgaggaagaggcagccgaggccaaggag
gagagcaatgcctatctcgaatttctgcacggcgaagcccaaaagtttagccgtgctatc
gacgacgatgaggaggatgagctcagagaagatagcgtcctgctcgagtcgccactcgac
aaggttgagccttaccagctcttccgaggcacacttctgaaaatgcaacaagagcaaccc
gagttctatagtagcctcgctggtcagctgtcgccagaggaccaaagcgtgcttcagagc
attatcgccaaggccgagacgattgccgcacaacaagcacagcagccacccaatgggggt
gccaactag
DBGET
integrated database retrieval system
