Cordyceps militaris: CCM_06516
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Entry
CCM_06516 CDS
T03108
Name
(RefSeq) DNA polymerase zeta catalytic subunit, putative
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cmt
Cordyceps militaris
Pathway
cmt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CCM_06516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_06516
Enzymes [BR:
cmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCM_06516
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
CCM_06516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
divDNApol
Sgf11_N
Motif
Other DBs
NCBI-GeneID:
18168530
NCBI-ProteinID:
XP_006671720
UniProt:
G3JMR4
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MDLFRVRLNCIDSYQATPTSYDPQLRNDIRPSQAARGPKVPVIRIFGSTETGQKVCVHVH
GAFPYLFIEYEGGLSQDEVGSFIFKLHLSIDHALSVSFRRDEQGLNSRFVARITLVKGVP
FYGYHVGYRFFLKIYMYNPMVMTRLTDLLQQGAILKQKFQPYEAHLQYLSQFMIDYNLFG
CDYLDASQTAFRAPVPAHNDGSNSSHLWHDLSIPPGRITDDHSLPRVSRCSIEVDICVQD
IINRTLVQERQLHHRFVELSEPLPSDMKLVHSMAGLWKDETARRRRRMPRLKPGSTPFPP
EALVPMSAEPRGSLSQAWLHEDEYKMKIEELVVADRESIGSAVPSFEEFVRPDPFEVTVK
TVLQSVEDLHPSSLVPALGLPSAALESKINPASSIEVDEQKARQVNAASESFYFPESDDE
ALHQLMGGDEDDSDSDTSLLDSAILEGKPLEELIPGVCVSGCKTGLLPEMAVSATIINAA
ENGGFIGRSRYHNLPPTRGRELKRAGSGLWSDMVSKKPKQEDATPPKIKMKRGARERRAT
FNLPSSPTPKHADGSTTPNGTLNFAIIKNQNDPHTRLRLSQRSKPSASQASDSGLPVKYQ
QDLSTFTSSGGHGFTFPSSQPFSLSQASLLNSTVSNGVDKIPHAIAETSSRPTVIYATLP
PPPNDADSLAQFRLPDQLYQSPFYSDERDVPARSREFAGREFRLTGNSLPYLPAFEFGDG
SNGALEITSIPSGLALERQRRNCSLRTWEIGTPPPTFAEITRWLDEKDRTANSQNFVQRR
SKYLSQIDGPTPKNKHGFKYTQQRKSTNVQHEVQYMSTMCLEVHVNTRAKLVPNPEEDEV
QCIFWCCKGDEVTYASQNDGDGTISGLIVLGSGGDVARRLRKTCKAEVIEEDSELNLLVR
LGDVVKELDPDILTGYEVHGGSWGFLMERARLKYDYDLCNELSRVNAQSHGRFGKQSDRW
GFNTTSTIRVTGRHMINIWRAMRGELNLLQYTLENVAWHLLHRRVPHYSYKTLTAWYKSG
KPSDLSKLLRYFQSRTKIDLQILEANELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMF
RIAKPENFLLISPSKKQVGGQNALECLPLVMEPQSALYSSPVLVLDFQSLYPSVMIAYNY
CYSTFLGRIVNWCGTSKMGFTEYKRQAGLMALLKDYINIAPNGMMFVKAEIRKSLLAKML
TEILEARVMVKSGMKEDKDDKMLQQLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIAD
SIVQTARETLERSIAYIHSVEKWGAEVVYGDTDSLFIHLKGRTKDQAFDIGNEIAQEISQ
MNPRPMKLKFEKVYLPCVLQTKKRYVGYMYETKDQAVPVFDAKGIETVRRDGTPAEQKIE
EKALRLLFETADLSQIKAYFQAQCTKIMRGAVSVQDFCFAREVRLGSYADKGPPPAGALI
SARKMLHDARAEPQYGERVPYVVITGAPGARLIDRCVAPEELLANPHWQLDAEYYISKNL
IPPLERLFSLVGASVRQWYDEMPKVQRIHHTAAAAGGKRSTLESYMKSTHCLVCGVKFLR
EAAAAAAAATPHAAALCPRCRAADTASLLALQTRLATDETKYQELLAVCRGCMGVAPLDD
VPCDSGDCPVFWTRMRQRTKVAGERANALPVMGSLTEALRRKDLEW
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttccgcgtcaggttgaactgcatcgacagttaccaggcgacgcccacttca
tacgacccgcaacttcgcaatgacatccgaccttcgcaggcggccagagggcccaaagtt
cccgtcattcgaatattcggttcaacagagacggggcaaaaagtctgtgtgcatgttcat
ggagcctttccatatttgtttattgaatatgaaggcggcctttcccaagatgaagtcgga
tcctttattttcaaactgcatctctcaattgatcatgctctatctgtgagttttcgacga
gatgagcaaggtctcaattcgagattcgtcgcccgcattacccttgtaaagggtgtacca
ttctatggctaccatgtcggatatcggttctttctcaagatttatatgtataatccgatg
gtgatgacgcgcttgactgatttacttcaacaaggtgctattttgaaacaaaaatttcag
ccttatgaagctcatctgcaatacctttcgcagttcatgatcgactacaacttgtttggc
tgcgactatttggatgcatcgcagacggcattccgtgcaccagtgcctgctcacaatgac
ggctcaaattcatcgcatctgtggcatgatctgtctatacctccaggtcgcataactgat
gatcattcactaccccgtgtaagccgctgttctatcgaagtggacatatgcgtgcaggac
attatcaaccggacgctggtgcaagaacggcaactccaccatcgctttgtcgagctctca
gagccgttacccagcgacatgaaactcgtccatagcatggcaggattatggaaagacgaa
acagcacggcgacgacggcgtatgccacggctcaaacctggtagcacgccatttcctccc
gaagctctggtgccaatgtctgcggaaccgcgaggttcattgtctcaagcctggcttcac
gaggacgaatacaagatgaagattgaagagcttgtcgtcgcagatcgcgaaagtatcggt
tctgcggtaccttcatttgaggaatttgtgcggccagatccatttgaagtgactgtcaaa
acagtcctgcaatctgtggaagatctgcatccttcaagcctcgtaccagcacttggtctt
ccgtccgcagctttagaaagcaaaattaatccggccagcagcattgaggttgatgaacag
aaagcgcggcaagtcaatgctgccagtgaatctttctactttccagaatcagatgacgaa
gctttgcatcaactgatgggaggcgacgaggacgattccgactcagatacgtccctccta
gattcggcaattttggagggaaagccattggaagagttgataccgggagtctgtgtgagc
ggctgcaaaacgggccttctccctgaaatggccgtatcagccactattataaatgctgca
gaaaatggcgggttcattggaaggtctagataccacaatctaccgccgactcggggaaga
gaattgaaacgtgctggttctggattatggtctgacatggtttcgaaaaaacccaaacaa
gaggatgcgactccgccaaagatcaagatgaagcgaggcgcccgagagcgcagagctacg
ttcaatttgccgtcctcgcctacaccgaaacatgcagacggatcaactacgccaaatggt
acactcaactttgcgataatcaagaaccagaatgaccctcataccagactgcgtttgagc
caaagaagcaaaccatcggcttcacaggcgagcgatagtggcttgcctgtaaagtatcaa
caagacctgtccactttcacctcgtctggcggccacggatttacgtttccatcctcacag
ccattttccctgtcacaagccagcctgctcaactctaccgtcagcaatggcgtggataag
atcccacatgccatcgccgagacatcgtcgcggccaactgtaatatatgccactctccca
ccaccaccaaacgacgcagactcgctggcacagtttcgcttgcctgatcagctttatcag
agcccgttttacagtgatgaaagggatgtccctgctagaagcagagagttcgcaggccgg
gaatttcgtttgactggtaattcgctaccgtatctgccggcctttgaatttggcgatggt
agcaatggagctttggagataacctccattccctccggtctagctctggagagacaaaga
aggaattgcagcttgcgaacttgggagattggtacccctccaccaacgtttgccgagatc
acacgttggcttgatgagaaagacaggactgcaaattcgcaaaattttgtccagcgtcgc
agcaagtatctgtctcaaattgacggcccgacgccaaagaataaacacggtttcaagtac
acgcagcaacgcaagtccaccaacgttcagcacgaagtgcaatacatgagcacaatgtgt
ctcgaggttcatgtcaacacgcgagcgaagttggtgccaaaccctgaagaagacgaagtg
cagtgtatattttggtgctgcaagggcgacgaagtcacgtatgcctcgcagaatgacggc
gacggtaccatttctggccttattgtgctgggatctggcggtgacgtagcaagacgcctc
cgcaaaacttgcaaagctgaagtcatcgaggaggattcggaattaaacctccttgtgcgt
ctcggtgacgtggtcaaggaactagatcccgacatattgacgggatatgaagttcatggt
ggatcctggggctttttgatggagagagcaagactcaaatatgactatgatctgtgcaac
gagctttccagagttaatgcccaatcacatggtaggttcggcaagcagagcgatcgctgg
ggcttcaacaccacatcgacaatccgtgtgacgggccgccatatgatcaacatctggcga
gcaatgcgcggggagcttaatcttctgcaatacaccctggagaatgttgcctggcatttg
cttcaccggcgtgtacctcattactcgtacaagacgttgacagcgtggtataagagcggc
aagcctagcgatctctcaaagctacttcgctatttccagagtcgcaccaagatcgatcta
cagattctcgaggcgaacgagctgattcctaggaccagcgagcaagcgagacttctcggc
gttgacttcttctctgtattctcccgcggctcgcagttcaaagtggagtcgatcatgttt
cgcatcgcaaagccggagaatttcctgctgatatcgccgagcaagaagcaggttggcggc
cagaatgcattggaatgcctgccacttgttatggagccacagagcgccctctatagcagc
ccggtactcgtgctggatttccagagcctgtatcccagcgtcatgattgcctacaattac
tgttactcgacctttttgggccgcatcgtcaactggtgcggaacaagtaagatgggcttc
acggagtataagcgccaggctggactcatggctctgctgaaagactacatcaacattgcg
cccaatggcatgatgtttgtaaaagccgagattcgcaagtctttgctggccaagatgttg
accgagattctggaggcgagagtcatggtcaagagtggcatgaaggaagacaaggacgac
aaaatgctacagcagctgctcaacaacagacaactggctttgaagctgctggccaacgtg
acctatggttacacctctgcctcgttctccggccgcatgccgtgctccgaaatcgccgac
agcatcgtgcagacggcgcgcgagaccctcgagcgatccattgcctacattcactctgtc
gagaaatggggcgccgaggttgtctacggcgacacagacagtctcttcatccatctaaag
ggccgcaccaaagaccaggcctttgacattggcaacgagattgcgcaagagatttcccag
atgaacccgcgcccgatgaagctcaagtttgaaaaagtgtacctcccgtgcgtgctgcag
accaagaagcgctacgtgggctacatgtacgagaccaaggaccaggccgtccctgtcttt
gacgccaagggcatcgagacggtccgtcgcgacggcacgcccgccgagcagaagattgag
gaaaaggcgctccgtctgctctttgagacggccgacctgagccagatcaaggcctacttc
caggcgcagtgcaccaagattatgcgcggcgccgtgagcgtccaggatttttgcttcgcg
cgcgaggtgcgcctcggaagctacgcggacaagggcccgccgccggccggcgccctcatc
agcgcgcgcaagatgctgcacgacgcgcgcgccgagccgcagtacggcgagcgcgtgccg
tacgtcgtcatcaccggcgcgcccggcgcccgcctcattgaccgctgcgtcgcccccgag
gagctcctcgccaacccccactggcagctcgacgccgagtactacattagcaagaacctg
attcccccgctcgagcgcctgtttagcctcgtcggcgccagcgtccgccagtggtacgac
gagatgcccaaggtccagcgcatccaccataccgcggccgccgccggtgggaaacgctcc
accctcgagtcgtacatgaagtcgacgcactgtctcgtgtgtggcgtcaagtttctccgc
gaggcggcggcggcggcagcggccgccacgccacacgccgcggcgctgtgtccgcggtgt
cgcgccgcagacacggcgtcgctgctcgcgctgcagaccagactcgcgacagatgaaacc
aagtaccaggaactgctcgccgtctgccgcggctgcatgggcgtggcgccgctcgatgac
gtgccgtgcgacagcggggactgtcccgtgttttggacgcgcatgcgccagcgcaccaag
gtggcgggcgagcgggcgaatgcgctgccggtgatgggaagcttgacggaggcgctgcgg
cgcaaggatctagagtggtag
DBGET
integrated database retrieval system
