Cordyceps militaris: CCM_06710
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Entry
CCM_06710 CDS
T03108
Name
(RefSeq) histone deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmt01009
]
CCM_06710
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_06710
04131 Membrane trafficking [BR:
cmt04131
]
CCM_06710
03036 Chromosome and associated proteins [BR:
cmt03036
]
CCM_06710
Enzymes [BR:
cmt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CCM_06710
Protein phosphatases and associated proteins [BR:
cmt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CCM_06710
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CCM_06710
Membrane trafficking [BR:
cmt04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CCM_06710
Chromosome and associated proteins [BR:
cmt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CCM_06710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arb2-like
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18168724
NCBI-ProteinID:
XP_006671914
UniProt:
G3JNB1
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MESDDHPMGEAEPVNGSASTEIDGEGAASNSANYDSESEPDENSVALQLLRRRGLLPTGC
CYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKMGLVYTGPQSELPRIVKESPTKYM
WRIPARPARRDEICLAHSAEHLTWVESIDKLSSSELRALTRQFDQGRESLYVGSMSYPAA
LLSAGGAIDTCKNVVEGQVKNAFAVIRPPGHHAEYDQAMGFCFFNNVPVAVRVCQQDYPD
ICRKVLILDWDVHHGNGVQNIFYNDPNVLYISIHVYQNGSFYPGKSPDPSVPDGGIENCG
IGPGLGKNINIGWHDQGMGDGEYMAAFEKLVMPIAKEFDPDLVVISAGFDAADGDELGGC
FVTPSCYAHMTHMLMSLAEGRVAVCLEGGYNLQAISNSAVAVARTLMGEPPPRMKIPMIN
KEAARTLAKVQAYQAPYWECMRPGVINVPETQSLDGNRLHDVIRVAQQQALQAKHNMVPL
YVQRDHISKSFENQVLVTPNLQDARRLLVIIHDPPQLLAQPDVIDGSLDSHNSWVVDGVT
QYINWAIGKKFAVMDVNVPAYVSQDEDMEAFIPGFKERALQEQMQSLMCYLWDNFLQLSD
AEEIFLMGVGDAYLGVKVLLINRDCKTRISGVVNFVTGSLRPVKSDIDTDLSSWYKDNSR
VYVAGDHACWSDYDLTRKVQKRRFGTVVRSELTGLNKMMRAHAEETHEWILGRVADTRGE
TTEDEKSPQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgacgatcacccaatgggggaggctgaacccgtgaatggctctgctagtacc
gaaattgatggtgaaggtgctgcgtccaattccgccaattacgactcggagagtgagcct
gacgagaattctgtcgccctacagctgctccgtcgccgcggtctacttcctactggatgc
tgctacgatgaccgcatgaaactccatatgaatgcagactttagcccgaacacccaccac
ccggaggatcccaggcgcattcatgaaatcttcaaagcctttaaaaagatgggcctcgtc
tataccggcccgcagtctgagctgcctcgaatcgtcaaggagtcacctacgaagtacatg
tggaggattcctgcccgacctgcccgaagagacgaaatctgcctagcacattccgcagaa
cacttgacatgggttgaaagcatcgataagttgagctcctctgagcttcgtgcacttacc
agacagtttgatcaagggcgtgagtcgttgtatgttggcagcatgtcttaccccgccgct
ttgctctctgctggcggcgccatcgacacctgcaaaaacgttgttgagggacaagttaag
aatgcctttgccgtcattcggccaccaggacatcatgcagagtacgaccaggctatggga
ttttgcttcttcaacaacgtgcccgtggccgtacgtgtttgtcagcaagattaccctgat
atctgccgcaaagttctgatcttggattgggatgtgcatcacggaaatggtgttcagaat
atcttttacaacgacccgaatgttctctacatttcaattcacgtatatcaaaacggctct
ttctatcctgggaaatcgcccgaccccagtgttcccgatggcggaatagaaaactgtggc
attggaccgggtctcggcaagaacatcaatattgggtggcacgatcagggaatgggtgat
ggagaatacatggctgcttttgaaaagcttgtaatgcccatcgccaaggagtttgacccg
gacttggttgtcatctcggctggctttgacgctgctgacggagacgagctgggtggttgc
ttcgttacaccatcatgttatgctcacatgacacacatgctaatgtctctcgctgaaggt
agggttgctgtctgccttgagggcggttataacttgcaggctatttccaactcagcagtc
gctgttgcacgaactctgatgggcgagccgccgccacgcatgaagattcccatgatcaat
aaggaggcggcgcgaactttagccaaggttcaggcttatcaagctccatactgggaatgc
atgcggcccggtgtcatcaatgtccccgaaacgcagtcgctcgatggaaaccgccttcac
gatgtcatacgcgttgcgcaacaacaggcgctgcaggccaaacataacatggtaccgtta
tacgtacagcgcgaccacatttccaagtccttcgaaaatcaggttcttgttaccccgaat
ctgcaggacgcgagacgtttactagtgattattcatgatccaccacagctgctggcgcaa
cccgacgttattgacgggtctttggatagccacaactcttgggtggtggatggcgtcacg
caatatattaactgggccatcgggaaaaagtttgcagtcatggacgttaatgttccagcc
tacgtatcgcaggatgaggatatggaggccttcattccaggattcaaggagcgagcactt
caggagcagatgcagtctctcatgtgctatctatgggataattttctgcagctcagtgat
gcggaggaaatcttcctaatgggcgttggagacgcataccttggtgtaaaggtgcttctt
attaacagagactgcaaaaccagaatatctggcgtcgtcaactttgtcacgggcagcttg
cgccctgtgaaatctgacattgatacagacctttcatcctggtacaaagataattcccgt
gtctatgttgcgggcgatcacgcctgctggtcggattatgatttgacgcgcaaggtgcag
aaacggcgctttggtactgtcgtgcgcagcgaactgactgggctgaataagatgatgcgc
gcacatgcggaggagacgcacgaatggatcctgggacgtgttgctgatacccgtggagag
acgactgaggatgagaagtcgccgcaatga
DBGET
integrated database retrieval system
