Cordyceps militaris: CCM_06786
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Entry
CCM_06786 CDS
T03108
Name
(RefSeq) AvaB protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cmt
Cordyceps militaris
Pathway
cmt04138
Autophagy - yeast
cmt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CCM_06786
04148 Efferocytosis
CCM_06786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmt04131
]
CCM_06786
Membrane trafficking [BR:
cmt04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
CCM_06786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
Ank_2
CNH
zf-Vps39_C
NUDIX
Ank
Ank_5
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
18168797
NCBI-ProteinID:
XP_006671987
UniProt:
G3JKZ2
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MASSNKSLHFSDSFVISCGTITVDTATSQVLIIRHRETNEFHLPKGRKDVHESLRDAALR
ETWEETGVRAQLLPVPITTRATAAAAAAPSSSVTEPLAVSQRVTEGVRKIIFWFVAAADS
TAVRDEGTQQEGEDFEALWVGWDEVRAMLTFEDDGRIAEAGIAAAAKTSRIFTLVPGTTS
HHSVKLPSGHTQRVLKLSLLPLQSRFTYFLRPTVQMAGAEDAAEPKPRRALSILPSFLKM
ALINFESHAWLPNLPLDVVLLIADRLNKQDQFLLADFIFDPIDRESSLRLGLSAARLETW
LNNTPRIPPGTLEKWRQTPRPKSGYYAKKIKDDEDIQGKIAASTIDAALLLAAKRHKEAM
VRTIMEHGKHLLMDVDSGLGAEVSKSTFEMLLRDGADPQSCAEPLIGSVKRGEVEFTEML
LGCGMKMGMTSSATPDTAVYWAARQSDTTILKVLAERKAQLKAACSSKDHFLGVPPEEQC
TPLYAAACVAPTTSCLEFLLENEYLIPSTEGAIPQYLLGHLVRGGYFPAGPIFGIRKPFL
TEEKGLESMKLLLKFGLSPDAKCGMNGELRVSLLGYATGRKKNKFVELLLEKGASLEIEG
YISPLSVALEENNIQAAELLLTAHHKKNLDLPYDVLWYDSVYSSMKKISKRLLDAIKREY
SLDLPESTGVRASKRRETPLLVAVNWGEWDMAKILIKNGAGENQGNDLADTAIKIAAIYS
SCSNVHGNGSLPKQDKAATPLLLKRCLSRIRRLPAQELPPATYNHAFRPHTNARRSEVAQ
ADQLRSSPSPPAMLSAFTARPIIELRPRDKSKIETILAHGAFCPRGPDAMASAAGGDVTA
PPKLNEPIPVIENGHAGNNSLSSSLPPNSSDHQPRPSSRGSARPTDLLREVEKFSTRAIE
QLAIIKEANTIVSLSNYHVSLHDLQTYELIETLDKTKNASGFAVTSNIVKDPDTGIPEII
SRLAVSVKRRLLLWSWHECELGGDTAEVVLAESIRSVTWASATKVVCGMNGGYVMVDALT
HEIEDITGPGTVGAAGQSSRFGAVSSAGMGYMGLGGYMPKPLASKLADGEVLLAKDINTL
FIDDTGKPLNQRQIPWGTAPESIGYSYPYIVALQPPAKGSLEVRNPDTLSLLQTISLPGA
AQLYFPPPNVSLAHAGKGFHISSERCVWKMGATDYDAQVKELVDAGNYDEAISVLNLLED
ALLKSKMETLREVKMQKAEILFGEKKYRKAMDLFNEDNVHAPPERVLALYPPVISGELSK
WAGKEEPKSSDADGATPRVSAETQRKSEDAGESTSAVGRFAGYFMGSQRRTAADAASIIS
VKREASDATDDKDSANSAASADKPLEGKDLMKAVLELNGYLAGTRARLQRVIDPATGLLK
PRDSAPGEDATDRFLRMGQNESEAQLQEKLQGTFRLVDTTLFRAYMLSQPSLASSLFRIP
NFCDPDVVHEKLVEQDRYNELIDFFHGKKLHKQALALLVRFGAAAKPDARAPALLHGPNR
TIQYLQTMPSSETDLILEHAAWTLRASPAFAMEIFTGDTENAETLPRARVAAFLQTIEPA
LERQYLEHVVMELEDATPDLHNRLVELYISALENMQHGDDEWEPLMGRFIKFLQAPNPVY
SLGKAFSTIPRNDPFFYEAQAVVLSNMGQHKQALEIFVFKMQNYAKAEEYVGVISNGTAF
IAGLTPSRYCNRIQRQAPTPAPHDASDDEDGDDAPSIYHTLLSLYLQPPSPHKSQLAPAL
DLLSKHGARLPAASSLSLIPDDLPVRALESYFGGRIRAANSMVHEAQVVAALRKAEGIAV
AAELHVGTAGKLAGRNRHVAITDEKLCVVCHRRLGGGMRVGGGSVVAVLPDNTVVHWGCL
SSMGGDQRSKTPSWARH
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcaacaaaagcctccatttctcggacagctttgtcatcagctgcggaacc
attaccgtcgataccgccacgtcccaggtgctcatcatccgccaccgcgagaccaacgag
ttccatctccccaagggccgcaaagacgtgcacgagtccctgcgcgatgctgcgctgcgc
gagacctgggaggagacgggcgtgcgcgcgcagcttcttcccgtccccatcaccacacgc
gccaccgctgctgctgctgctgcaccgagctcgtccgtgacggaacccctggccgtctcg
cagcgcgtcaccgagggtgtgcggaagatcatcttttggtttgtggcagcggcagactcg
acggcggtgcgggacgagggcacgcagcaagagggcgaggactttgaggcgctctgggta
ggatgggacgaggttcgcgcaatgttgacgtttgaggacgatgggcggatcgccgaggcg
gggatcgcggcagcagccaaaacgtcacgcattttcacgttggtccctggcacaacgtca
caccattctgtcaagcttccatcgggtcatacccagcgagtgttgaagctatctctgtta
cccctacagtctcgcttcacttatttcctccggcctacagtccaaatggcaggggcggaa
gatgccgctgagcctaaacctcgtcgtgcgctttccattctcccgagttttctcaaaatg
gcccttatcaacttcgagagccatgcttggctacccaacctcccactcgatgtcgtgctc
cttattgcggatcggttgaacaaacaagaccaatttttgctggcagattttatcttcgac
ccgatcgatcgggaatcgagtttgcgtcttgggttgtcagcagcgaggctcgagacgtgg
ctcaacaacactccccgtattcccccaggaacacttgaaaagtggcgtcagactcctcgt
cccaagtcaggatattacgccaagaaaattaaggatgatgaggacatccagggcaagatt
gcggcttctacgattgacgcagctttactgcttgccgccaagagacataaggaagccatg
gtgcgaacaataatggaacacggtaaacatctgttgatggatgttgatagtggacttggg
gctgaggtttcgaaatcgacattcgagatgttattgagggacggagccgacccccagtct
tgcgccgaacccctcattgggagtgtgaagcgaggagaagtcgagttcacagagatgttg
ctgggctgtggaatgaagatgggcatgacgtcgagcgcaacgccagatacagcggtgtat
tgggccgcccgccaatccgatacaactatcttgaaggtcttggccgaaagaaaagcacaa
ctaaaggcagcttgctcctcaaaggatcatttcctaggcgtaccgccagaggagcagtgt
acgccgctttatgcagcggcctgcgttgctccaactacctcgtgtctggagttcctgctc
gaaaatgagtatctgataccgtcgacggaaggtgctattcctcagtatcttctcggacat
cttgttcgcggcggttactttccagccggacccatctttggaattcgtaagccctttctt
acggaggaaaaggggctcgagtctatgaaacttcttttgaaatttggtctcagtcccgat
gccaagtgcggcatgaatggagagcttcgtgtaagtctcctcggctatgctacaggtagg
aagaagaacaagttcgtggaactgctacttgagaaaggtgccagcctggagattgaaggc
tacatatcaccattgtcagtagccctcgaagaaaacaatatccaagcagccgagctcctc
ctcacggcccaccacaagaagaatttggacctgccttacgatgtgctctggtacgactca
gtttattcctcaatgaaaaaaatatccaagcggcttctggacgccatcaaaagggaatat
tctctcgacctcccagagagcactggagtccgggcttcaaaacggcgagagacaccactc
cttgtggcagtcaattggggagagtgggacatggcgaagattctaatcaagaatggtgcg
ggtgaaaaccaagggaatgacttagcagacactgccatcaagattgcggccatctatagt
agttgctcaaacgttcacggcaacggatccctcccaaagcaagacaaagctgcaacacct
ctactgctcaaacgttgcctttcaagaattcgtcgtctacctgcccaagagctcccgcca
gctacctacaatcacgccttccgcccccatactaatgctcgtcgatccgaggtagcccag
gctgaccagcttcggagctcgccctccccgcccgccatgctctctgcatttacggcgcgg
ccaatcattgagctgcggccgcgcgacaaatccaagattgaaacaattcttgcccacggt
gcgttttgtccaagaggcccagacgcgatggcgtcggcagctggcggggacgtcaccgca
ccccccaaactcaacgagccgattccggtcatcgaaaacggacacgctggcaacaactcc
ttatcgagcagcctcccaccgaacagcagcgaccaccagccgcgcccatcctcgcgcggc
tccgcacgaccgaccgacctcttgcgcgaagtcgaaaaattctctacgcgcgccattgag
cagctggccattatcaaggaagccaatacaatcgtgtcgctctccaactaccatgtgtcg
cttcacgatctgcagacctacgagctcatcgagacgctcgacaagaccaagaatgcgtcg
ggcttcgccgtcacgtcaaacattgtcaaggacccggacacgggcatccccgaaatcatc
tcccgactcgctgtttccgtcaagaggcgcctgcttctctggagctggcacgagtgcgaa
ctcggcggcgacaccgccgaagtggtgcttgccgagtcgatccgcagtgtgacgtgggcg
agtgccaccaaggtcgtctgcggcatgaatggcggatacgtcatggtcgatgcgctcacc
catgagatagaagatatcactgggcctggcacagtaggcgccgccggacaaagcagccgc
ttcggcgccgtcagcagtgccggcatgggctacatgggtctgggcggatacatgccaaaa
ccgctggcgtccaagctagcggacggtgaggttcttctcgcaaaggacatcaatacgcta
tttatcgatgacacgggcaagccactaaaccagcggcagattccttgggggacagcgcca
gagtctatcggctattcatacccatacattgtggctctgcagcctccagcaaaggggtca
cttgaagtacgaaatccggataccctttcgctgctacaaacaatatcgctccctggtgca
gcccagctatactttccgcccccaaacgtaagcctagcacatgctggcaagggtttccac
atctctagtgaacgatgtgtctggaaaatgggcgcgacggattatgacgcgcaagtcaag
gagctggttgatgccggtaactacgacgaagccatcagtgtcctgaatctgctagaggac
gcgctgctaaaaagcaagatggagacgctgagagaggtcaagatgcaaaaggcagagata
ctctttggcgagaagaaatatcgcaaggcaatggacctgttcaatgaggataatgtccac
gcaccaccagaacgggtgctggccttgtatccgcccgtgatctcaggcgagctctcgaaa
tgggctggcaaggaagaacccaagtctagcgatgctgacggcgctacaccccgggtcagc
gccgaaacgcagcgtaaatccgaggacgctggcgagagcacctctgcagtcggccgtttc
gcgggctactttatgggatctcagcggaggacggccgccgacgccgcgtcgatcatttcg
gtgaagagggaagcttccgatgccacggatgacaaagattcggcaaactcggcagcatca
gcggacaagcctcttgaaggtaaagacttgatgaaggctgtccttgagctgaacggatac
ctggccggcacgcgagcacgtttgcagcgcgtcattgatcccgccaccggacttctcaag
cccagagactcggcaccaggggaagatgcgaccgaccgttttctgcgcatgggccaaaac
gaaagcgaagcgcagctccaagagaagctgcaaggcacgtttcgcctcgtggacacgacg
ctgttccgcgcctacatgctctcccagccgtcgctcgccagctccctctttcgcatcccc
aacttttgcgacccggacgtggtccacgagaagctcgtcgagcaggaccggtacaacgag
ctcatcgacttcttccacggcaagaagctgcacaagcaggccctggcgctgctggtgcgg
ttcggcgccgcggccaagcccgacgcgcgcgcgccggcgctgctgcacggcccgaaccgc
accatccagtacctgcagacgatgccctcgtcggagacggacctgatactcgagcatgcc
gcgtggacgctgcgcgccagtccggcgtttgccatggagattttcacaggcgacacggaa
aacgcggagacgctgccgcgggcgcgcgtcgccgcctttttgcagacgattgagcccgcg
ctcgagcggcagtacctcgagcacgtcgtcatggagctcgaggacgcgacgccggacctg
cacaacaggctcgtcgagctctacatttcggcgctcgagaacatgcagcacggcgatgac
gagtgggagccgctgatggggcgcttcatcaagtttctgcaggcgccgaaccccgtgtac
agtctcggcaaggcgttttccacgattccgagaaatgatccgttcttttacgaggcgcag
gctgtggtgctcagcaacatgggacagcataaacaggccttggagatttttgtcttcaag
atgcaaaactatgccaaggcagaagagtacgttggcgtgatctcaaacggcactgcattc
attgccgggctaactccgtctagatactgtaatcgtattcaacgccaagctcctacgcca
gctcctcatgatgcatccgacgacgaagatggagacgacgcgccctccatctaccacacg
ctgctctccctatatctccaaccgccgtcgccgcacaaatcgcagctagcgccggcgctc
gacctcctctccaagcacggcgcgcgcctccccgcggcgtcgtcgctgagcctcatcccc
gacgacctgccggtgcgggcgctcgagtcgtactttggcgggcgcatccgggcggccaac
agcatggtgcacgaggcgcaggtggtggcggccctgcgcaaggccgagggcatcgccgtc
gccgcggagctgcacgtgggtactgcaggcaagctggcgggacgcaacaggcacgtggcg
attaccgacgagaagctgtgcgtcgtctgccatcggcggctgggtggcggcatgcgcgtc
ggcggcggcagcgtggtggcggtgctcccggataacacggttgtgcactgggggtgtctg
agcagcatgggaggggaccagcgatcaaagacgccgagctgggcccggcactag
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