Cordyceps militaris: CCM_06903
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Entry
CCM_06903 CDS
T03108
Name
(RefSeq) transcription initiation factor iif
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cmt
Cordyceps militaris
Pathway
cmt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CCM_06903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_06903
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CCM_06903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Tau95
Motif
Other DBs
NCBI-GeneID:
18168914
NCBI-ProteinID:
XP_006672104
UniProt:
G3JLA9
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MADTGFVKPEAETGEPAPAVDDEDLFEDAGDLEFYDRSQGPTFETLYLARVPRYMWEAWQ
RLGERLKDDDEVQIGTLRTWNEPGVPDADGHIGPESTKLRMLLDPGCGEHHELPREYDLD
VLERDVRNHFIFTEEDLPSYKAKNKARQDQINAGIPAHILRQKEAAAAAAAAAAAGGGGP
QRHTFDRKSRFQPYFRKAIPKKTKVFGKIHYDVRVEPRNTGEEERYLGQQLFQAEHSRAK
LQIISRNTASSIINPGTAGAVGWAGNFIKNTPSLVKPKKGEIFKAARIPKNQLLDLIFDC
FRLYQYWSMKALRQRTQQPDSYLRQVLEEVAVLNKSGPFANHYCLSDAYRDKGGNESREA
AAETVDDGDDDEPDEMEDVVLS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggcttcgtcaagcccgaggccgagacgggcgagcccgcgcccgccgtc
gacgacgaggacctgttcgaggacgcgggcgaccttgaattctacgacaggagccaaggc
ccgacctttgagacgctctacctcgcgcgcgtcccccgctacatgtgggaggcctggcag
cgccttggcgaacggctcaaagacgacgatgaggtgcagattggcacactgcgcacctgg
aacgagcccggcgtccccgacgccgacggccacatcggccccgagtccaccaagctgcgc
atgctgctcgacccgggctgcggcgagcaccacgagctcccgcgcgagtacgacctcgac
gtcctcgaacgcgacgtccgcaatcacttcatcttcaccgaggaggacctgcccagctac
aaggccaagaacaaggcccgccaggaccagatcaacgccggcatccccgcccacatcctg
cggcaaaaggaggcggcggcggcggcggcggcggcagctgctgctggcggtggcgggccg
cagcggcacacgtttgatcgcaagtcgcgctttcagccgtactttcgcaaggcgatcccg
aaaaagacaaaggtttttggcaagatacactatgatgttcgcgtcgagcctcgcaatacg
ggagaagaggagcgctacctcggccagcagctgttccaggccgaacactcgcgagccaag
ctgcaaatcatcagcagaaacacggcatcgtccattatcaaccccggcaccgctggcgcc
gttggctgggccggcaactttatcaaaaatacaccctctctcgtcaagccgaaaaagggc
gaaattttcaaggctgctcgtatccccaagaaccagcttctcgatctcatcttcgactgt
ttccgtctatatcagtattggtccatgaaggcgctccgtcagcgcacgcagcagcccgac
tcgtacttgcggcaggtgctcgaggaggtggctgtgctcaacaagtccggcccgtttgcc
aatcactactgcctgagcgacgcctacagagacaagggcggcaacgagtcccgcgaggct
gcggccgagacggtcgacgacggcgacgacgacgagcccgacgagatggaggatgttgtt
ctctcttag
DBGET
integrated database retrieval system
