Cordyceps militaris: CCM_07791
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Entry
CCM_07791 CDS
T03108
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
cmt
Cordyceps militaris
Pathway
cmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCM_07791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_07791
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CCM_07791
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CCM_07791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
PCB_OB
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
18169801
NCBI-ProteinID:
XP_006672994
UniProt:
G3JQN5
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MATTEIPTLAIPGRVLGPVSKYAPGAGTHIFEGNVVSSLMGNVTIIPPSKTPGPAKRLNK
ITAPVSDELSTITVARHGRKREILPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQ
GVIRVQDVRATEKDKVKIYESFKPGDVVRAQVISLGDQANYYLSTASNELGVIMATSEVG
NDMVPVSWKEFKDPETGAGELRKVAKPA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggctactacggaaatcccaacccttgcgattcctggcagagtactcggccccgtgtcc
aaatacgcgccgggcgccggaacacacatcttcgaaggcaacgtggtgtcgtcgttgatg
ggcaacgtgaccatcatcccgccctccaaaacacccggccccgcgaaacgactcaacaaa
atcacggcgcccgtatccgacgagctctctacgattaccgtcgcgcgtcacggccgcaag
cgcgagatcctccccgacgtcaacaacattgtgctagcccgcgtggtgcgtctaatgccc
aagcaagccattgtcgtgatccagcaggtcggcgacacggtgctgcagacggaatggcag
ggcgttattcgagtgcaggatgttcgagccacggaaaaggacaaggtaaagatttacgag
tcgttcaagcctggcgatgttgtccgggcccaggtgatttcgctgggagaccaggccaac
tattatctgtcgaccgcatccaacgagctcggcgtcatcatggcgacgagcgaggttggc
aacgacatggtgccggtcagctggaaagagttcaaggatcccgagacgggcgccggtgag
ctgcgcaaggttgccaagccggcttga
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integrated database retrieval system