KEGG   Cordyceps militaris: CCM_07791
Entry
CCM_07791         CDS       T03108                                 
Name
(RefSeq) exosome component 1
  KO
K07573  exosome complex component CSL4
Organism
cmt  Cordyceps militaris
Pathway
cmt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CCM_07791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmt03019]
    CCM_07791
Messenger RNA biogenesis [BR:cmt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CCM_07791
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     CCM_07791
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4 PCB_OB S1_RRP5
Other DBs
NCBI-GeneID: 18169801
NCBI-ProteinID: XP_006672994
UniProt: G3JQN5
LinkDB
Position
Unknown
AA seq 208 aa
MATTEIPTLAIPGRVLGPVSKYAPGAGTHIFEGNVVSSLMGNVTIIPPSKTPGPAKRLNK
ITAPVSDELSTITVARHGRKREILPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQ
GVIRVQDVRATEKDKVKIYESFKPGDVVRAQVISLGDQANYYLSTASNELGVIMATSEVG
NDMVPVSWKEFKDPETGAGELRKVAKPA
NT seq 627 nt   +upstreamnt  +downstreamnt
atggctactacggaaatcccaacccttgcgattcctggcagagtactcggccccgtgtcc
aaatacgcgccgggcgccggaacacacatcttcgaaggcaacgtggtgtcgtcgttgatg
ggcaacgtgaccatcatcccgccctccaaaacacccggccccgcgaaacgactcaacaaa
atcacggcgcccgtatccgacgagctctctacgattaccgtcgcgcgtcacggccgcaag
cgcgagatcctccccgacgtcaacaacattgtgctagcccgcgtggtgcgtctaatgccc
aagcaagccattgtcgtgatccagcaggtcggcgacacggtgctgcagacggaatggcag
ggcgttattcgagtgcaggatgttcgagccacggaaaaggacaaggtaaagatttacgag
tcgttcaagcctggcgatgttgtccgggcccaggtgatttcgctgggagaccaggccaac
tattatctgtcgaccgcatccaacgagctcggcgtcatcatggcgacgagcgaggttggc
aacgacatggtgccggtcagctggaaagagttcaaggatcccgagacgggcgccggtgag
ctgcgcaaggttgccaagccggcttga

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