Cordyceps militaris: CCM_07954
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Entry
CCM_07954 CDS
T03108
Name
(RefSeq) eukaryotic initiation factor 4A-12
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cmt
Cordyceps militaris
Pathway
cmt03013
Nucleocytoplasmic transport
cmt03015
mRNA surveillance pathway
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_07954
09122 Translation
03013 Nucleocytoplasmic transport
CCM_07954
03015 mRNA surveillance pathway
CCM_07954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_07954
03041 Spliceosome [BR:
cmt03041
]
CCM_07954
03009 Ribosome biogenesis [BR:
cmt03009
]
CCM_07954
03012 Translation factors [BR:
cmt03012
]
CCM_07954
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCM_07954
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CCM_07954
mRNA cycle factors
Stress granule specific factors
CCM_07954
Spliceosome [BR:
cmt03041
]
Complex C
Other components
EJC/TREX
CCM_07954
Ribosome biogenesis [BR:
cmt03009
]
Eukaryotic type
90S particles
Helicases
CCM_07954
Translation factors [BR:
cmt03012
]
Eukaryotic type
Initiation factors
eIF-4
CCM_07954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
TniB
COG4_N
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
18169964
NCBI-ProteinID:
XP_006673157
UniProt:
G3JP92
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MADAPGGIDRNADEKMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIV
QVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRESQALVLSPTRELATQIQSVIMALG
DYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEAD
ELLNKGFREQIYDVYRHLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEG
LKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGE
MPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR
FGRKGVAINFVTTDDVRILRDIECK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcccccggtgggattgaccgcaatgcggacgagaagatggagttttcgacc
tccaaggaggtcactgtccatcctacctttgagtcaatgtcgctaaaggaaaatctccta
cgcggtatctacgcatacggttacgaatcgccctccgccgtccagtcccgcgccatcgtc
caagtctgcaagggccgcgacactattgcccaagcgcagtcgggcaccggtaaaacggcc
accttttccatcagcatgctgcaggtcatcgacacagccgtgcgcgagtcgcaggccctc
gtgctgtcgccgacacgcgagctcgccacccagatccagtccgtcatcatggcgctgggc
gactacatgaatgtgcagtgccacgcctgcatcggcggcaccaacgtcggggaggacatc
cgcaagctcgattacggccagcacattgtgtcgggcacgcccggccgcgtcgccgacatg
attcgccgccgccacctgcgcacgcgccacatcaagatgctggttctcgacgaagccgac
gagctgcttaacaagggctttcgcgagcaaatctacgacgtgtaccgccatctgcccccc
gcgacgcaggtcgtcgtcgtcagcgccacgctgccgtacgacgtgctggacatgacgacc
aagttcatgacggacccggtccgcattctggtcaagcgcgacgagctgacgctcgaaggc
ctgaagcagtactttatcgcggtcgaaaaggaggactggaagtttgataccctgtgcgat
ctgtacgacaccctgaccatcacgcaggccgtcatcttttgcaatacccggcgcaaagtg
gactggctgacggacaagatgcgcgaggccaactttaccgtgagcagcatgcacggcgag
atgccgcaaaaggagcgcgatagcattatgcaggactttcgccagggcaacagccgtgtg
ctgatctcgacggatgtctgggcccgcggtatcgatgtgcagcaggtcagcctggtcatc
aactacgatctgccgagcaaccgtgaaaactacatccaccgcattggtcgtagcggtcgc
tttggtcgcaagggtgtcgccatcaactttgtcaccacggatgatgtccgcattcttcgc
gatatcgagtgcaagtag
DBGET
integrated database retrieval system
