Cordyceps militaris: CCM_08357
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Entry
CCM_08357 CDS
T03108
Name
(RefSeq) ATP-dependent rRNA helicase RRP3
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmt03009
]
CCM_08357
03029 Mitochondrial biogenesis [BR:
cmt03029
]
CCM_08357
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCM_08357
Ribosome biogenesis [BR:
cmt03009
]
Eukaryotic type
90S particles
Helicases
CCM_08357
Mitochondrial biogenesis [BR:
cmt03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
CCM_08357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18170365
NCBI-ProteinID:
XP_006673559
UniProt:
G3JR18
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MSDLKRRKASRDEPPKPVEPEQSAPSSESEDESATVEAAQADDKEEAEPPKTFKELANTP
HHQGIVDALCEACETLGYKTPTGIQAQSIPVALQGRDVIGLAETGSGKTAAFALPVLQAL
LDKPQPLFGLVLAPTRELAAQIGQTFEALGALISLRCAVIVGGLDMVPQAVALGKKPHVI
VATPGRLVDHLEKTKGFSLRTLKYLVLDEADRLLDMDFGESIEKLLKFIPRERRTYLFSA
TMSSSVESLQRASLRDPVRVSVSASKYQTVSTLKQHYVFIPHKRKDTYLIHIINEFAGKS
CIVFTRTVYETQRCAVLLRTLGFGAIPLHGQLSQSARLGALNKFRGGTREILVATDVAAR
GLDIPKVDVILNYDIPSDSKTYIHRVGRTARAGKSGVAISIVTQFDIELFTRIEAALGKK
LDEFDTKEEEVMTFQSRVQEAQRHARNEMNNIMESRNKGATMRKGRDNKRRRDDMDRGER
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttgaaaagacgtaaagcctcgcgcgacgagcccccaaagcctgtcgaacct
gaacaatctgcccccagcagcgaatccgaggacgaatccgcgactgtcgaggccgcccaa
gccgatgacaaggaggaagcagagccgccgaagacctttaaagaactcgctaatactccc
caccaccagggcatcgtcgacgccctctgcgaagcctgcgaaaccctcggctacaagacc
ccaaccggcatccaagcccagtcgatccccgtcgcgctgcagggccgcgatgtgattggc
ctcgccgagacgggctccggaaagacggccgcgtttgcgctgcccgtgctgcaggcgctc
ctcgacaagccgcagccgctgttcggcctggtgctggcgccgacccgcgagctggccgcg
cagattggccagacgtttgaggcgctcggcgcgctcatctcgctgcgctgcgccgtcatc
gtcggtggcctcgacatggtgccgcaggccgtcgcgctcggcaagaagccgcacgtcatc
gtggccacgcccggccggctcgtggaccacctcgaaaagacaaagggcttctcgctgcgc
acgctcaagtacctcgttctggacgaagccgaccggctgctcgacatggactttggcgag
agcatcgagaagctgctcaagttcatcccgcgcgagcgccgcacctacctcttctctgcc
accatgagctccagcgtcgagtcgctgcagcgcgcctcgctgcgggaccccgtccgcgtc
agcgtcagcgccagcaagtaccagaccgtgtcgacgctgaagcagcactacgtcttcatc
ccgcacaagcgaaaggacacgtacctcatccacatcatcaacgagttcgccggcaagtcg
tgcatcgtctttacgcgcaccgtgtacgagacgcagcgctgcgccgtgctgctgcgcacg
ctcggcttcggcgctatcccgctccacggccagctttcgcagtcggcgcgcctcggcgcc
ctcaacaagttccgcggcggcacccgcgagatcctcgtcgccaccgacgtcgccgcccgc
ggtcttgatatccccaaagtcgacgtcatcctcaactacgacatcccgtccgactccaag
acgtacattcaccgcgtcggccgcaccgcacgtgccggcaagtcgggcgtcgccatcagc
atcgtcacccagtttgacatcgaactcttcacccgcatcgaagccgccctcggcaagaag
ctcgacgagtttgacacgaaagaggaagaggtcatgaccttccagagccgcgtgcaggag
gcccagcgccacgcccgcaacgagatgaataacatcatggagtcgcgcaacaagggcgca
acgatgagaaagggacgcgacaataagcggcgacgagacgacatggacagaggagagcgg
taa
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