Cordyceps militaris: CCM_08499
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Entry
CCM_08499 CDS
T03108
Name
(RefSeq) CCR4-NOT transcription complex, subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cmt
Cordyceps militaris
Pathway
cmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCM_08499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_08499
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CCM_08499
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CCM_08499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
DUF1192
Transcrip_reg
EAD9
DUF7310
Motif
Other DBs
NCBI-GeneID:
18170506
NCBI-ProteinID:
XP_006673700
UniProt:
G3JRR5
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MAARKLQQEVDKCFKKVAEGVAEFESIYDKIELSNNPAQKEKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLDHRKLIETQMEKFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAK
LEAGEFLSSMVEELEQQIETLEAESEQIQATMKKGKSQTAKAERIAEIERIIERHKWHQG
KLELIRRSLENGGVETEQVNELEESIRYYVSDGVNEDFMEDDEMYDELNLEDDEGIFGMG
ADGERGSSQDTQSVQQDDPEPIPEPAAPKPPRKVAKENEPVSTRKGSSQTKSPLPALATL
HTPLSTISNGSTPSMKPATIPTRAPGETLKYASAAAAAAASDKANVGISPLPPPPGSAGI
SLASGPSVTNSPATAAAQPARQTPIQAPATVAVPSAEEPSPEAVLAPIAPASTSNRGPKK
SKVVGKQPAVAAEAKEVPPATNGATLNGAKSKGLAHVPEEESIYHLPASLQDLVESYETA
KKHPPSQSAPSTQRLMEASHANCPDQLDADVPRTYFPENPVPQGGSSFPRTPLAIFEDPR
LYQRIDPDTLFYVFYYKQGSAQQYLAAKALKDQSWRFHKQYQTWFQRHEEPKSITEEYEQ
GTYRFFDYESTWMNRRKADFKFAYKFLEDEV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgaaaattgcaacaggaagtcgacaagtgcttcaaaaaggtggctgaaggt
gtcgctgagttcgagtccatctatgacaagatcgagctatcgaataacccggcacaaaaa
gagaagctggaggacaacttgaagcgtgaaatcaagaagctgcagcgtcttcgcgatcag
atcaagacatgggctgccagcaacgacatcaaggacaaggccccgttgctggatcaccgc
aaattgatagaaacccaaatggaaaaattcaaagcggtagaaaaggcaatgaagacgaaa
gcctactccaaagaagggttatcagcggcagcgaaactagatccgaaggagcaagccaaa
ctcgaagcgggcgagtttctaagtagcatggtcgaggagctcgaacaacagatcgagacg
ctagaggccgagagcgagcaaatacaagcgaccatgaagaagggcaagagccagacagcc
aaggcggagcgcatcgcagagattgagcgcataatagaacggcacaagtggcatcagggc
aagctggagctcatccgacggtctctggaaaacggcggtgttgagacggagcaagtcaac
gaactcgaggagagcatccgctactacgtgtccgatggcgtgaatgaggactttatggag
gacgacgaaatgtacgacgagctaaatcttgaggacgacgaaggcatctttggcatgggc
gcagatggcgagagagggtcgtcgcaagacacccaatccgtgcaacaggacgaccctgaa
ccgatacccgaacccgccgcgccaaagcccccgcgaaaagtggcaaaagagaacgaacca
gtatccacgcggaaagggtcctcacagacgaaatcacccttaccagcgcttgccacactg
cacacgccattgtcaaccatcagcaatggttcgactcctagcatgaagcccgcgacgata
ccgacaagagcacctggcgagacattaaagtacgcctccgccgcggcggctgctgcggca
agcgacaaggccaacgtggggatatcaccactacctccaccccctggtagtgctggcatt
tcgcttgcttccggtccctcggtaaccaactcgccagctaccgctgccgcccaacccgcg
cggcaaacgccgatacaagcaccagcgacggttgccgtcccgtccgccgaggagccgtcc
cctgaggctgtcctcgcgccgattgcgccagcatccacgtccaaccgcgggcctaagaag
tcaaaggtggtcggcaagcaacccgccgtggctgccgaggccaaggaagtgccgccggcg
accaacggcgcgacgcttaacggcgccaagtccaaggggctagcgcacgttcccgaggag
gagagtatatatcacctcccggcatcgctgcaggacctagtcgagtcgtacgagacggca
aagaaacacccgccgtcgcagtcagcgccgtcgacgcaaaggctcatggaagccagccac
gccaactgccctgaccagctcgatgccgacgtaccgcgcacgtatttcccagagaatccc
gtgccgcagggcgggtcaagcttcccgcgcacaccactggccatctttgaggacccacga
ctctaccagcgcatcgaccccgacacgctgttttatgtattttactacaagcagggctcc
gcgcagcagtatcttgcagctaaagcactcaaggaccaaagctggcgctttcacaagcaa
tatcagacctggtttcaacgacatgaagagcccaagagcatcactgaagagtacgagcaa
ggaacatataggttctttgactacgaaagcacatggatgaatcgtcgcaaggccgacttc
aagtttgcctacaaatttctcgaagacgaagtctag
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