Cordyceps militaris: CCM_08935
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Entry
CCM_08935 CDS
T03108
Name
(RefSeq) ATP dependent RNA helicase
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_08935
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CCM_08935
Spliceosome [BR:
cmt03041
]
Complex C
Other components
Complex C specific factors
CCM_08935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
18170940
NCBI-ProteinID:
XP_006674134
UniProt:
G3JSP3
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAENDLDASFIPALHKPPALLPIAKHRESLLYTIETYPVTIVIGQTGSGKTTQIPQFLEK
AGWCNDGKIIGVTQPRRVAATTVALRVADEVGCEVGKEVGYSIRFEDVTSASTRIKFLTD
GLLIREALVDPLLSRYSVIMVDEAHERSISTDILLGLLKKIRRKRPELRIIISSATLEAE
TFLRFFTLSSEEAPKTDNENGTSKVGTVVSLEGRTFPIDLMHLEAPAENYVEKAISTVVD
IHTQEGEGDILVFMTGREEIDFAVQAISERATDLEAKYGALQPMPLYAGLTTEEQMYVFD
KPREGTRKVVFSTNIAEASVTIDGVVFVVDTGYVKLRAYNPKTGIESLTATPISKASAAQ
RAGRAGRTKPGKCFRLYTEQAFNGLAQSNPPEIQRSNLAPTILQLKALGIDNIVRFDFLS
PPPSQLVGKALELLYSLGALDEYAKLTRPLGMRMAELAVEPMMAKTLLSAPSFGCLSEML
SIAAMTSLGSNVWFHHEGERKAMESARRKFAAEEGDHLTLLNAYQAFVARGKKEAKFCHG
NHLNFRAMTRAVSIRAQLKRYLERFGIVVDETLSQPQQQDRASKAEAILRCLTAGYFAHA
ARMQADGTFRNVEGGTVLHAHPSSLLFGRKADWVVFHEVMETNDKTYIREVSKTEKGWLL
EYAPEFYQVTIYASNELHDSASMADTTIAGLRLFPEVLSRCKYSLSGLLPNWAIRPARRI
WPS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgatcttgatgcaagcttcataccggcattgcataagcccccggcgctg
ctgcctatcgccaaacatagagagagcctgctatacacaatagagacatatccggtgacg
atagtcattggccaaaccggatccggaaagacgacacagataccccagtttctggaaaag
gctggatggtgcaatgacggcaagataattggcgtgacgcagccaagacgcgtcgcagcc
acgacagttgccttacgcgtcgctgatgaggtcgggtgcgaggttggaaaagaggtggga
tactcgatacgtttcgaggatgtcacctccgcgtcgacgcgtatcaagtttctcaccgac
ggcctacttatccgcgaggcgctggttgacccgctcttgagcagatattcggtgattatg
gtcgacgaagcccatgagcggtccatcagcacagatatcttacttggactgctaaaaaag
attcgcaggaagcgccccgagctgcgcatcatcatcagcagcgcgacgctagaggcggag
acgtttctgagatttttcaccttgagcagcgaggaagcgccaaaaactgacaacgaaaat
gggacaagcaaagtaggaacggtggtcagcctggaaggtcggacgtttccgattgatttg
atgcatctagaagcacctgcggaaaattatgtcgaaaaggccatctccacagtcgtggac
atacacacccaggaaggcgagggcgatatcttggtgtttatgactggacgagaggaaatc
gactttgcagtacaggctatttcagaacgcgccacggacctcgaagccaagtacggagcg
ttgcagccgatgcctctctatgctggtctgactacggaagagcaaatgtacgtctttgat
aaaccacgcgaaggaacaagaaaagtggtattttccacgaacattgccgaagcatcagtg
accatcgacggggttgtgtttgtcgtcgacacgggctatgtcaagttacgcgcctacaat
cccaagacgggtatcgagtccttaacggcaacacccatatccaaggcgtctgccgcacag
cgcgcaggacgtgccggtcgaacgaagcccggcaaatgttttcgtctctacacggagcaa
gccttcaacgggctggcacaaagcaacccgcccgagattcagcgatcgaatcttgcccca
accatactccagctcaaggctctcggcatcgacaacatcgtgcgcttcgactttttatcg
ccgccaccctcgcagctcgtcggcaaagcactggagcttttgtactcactcggcgcgctg
gacgagtacgccaagctgacgcggccgctgggcatgcgtatggcggagttggccgtggag
ccgatgatggccaagacgcttctgtccgcgccgtcgtttggctgcctcagcgagatgctc
tcgattgcggccatgacgagtctgggtagcaacgtgtggttccatcatgagggcgagcgc
aaagccatggagagcgcgcggcgcaagtttgccgccgaggagggcgaccacctcacgctg
ctcaacgcgtaccaggcctttgtcgcgcgtggcaagaaagaagccaagttttgccacggt
aaccacctcaactttcgggccatgacgcgcgccgtgagcatccgcgcgcagctgaagcgg
tacctggagcggttcggcatcgttgtggacgagaccctgtcgcagccacaacagcaagac
agggccagcaaggccgaggcgatcctgcggtgcctgacggcgggctactttgcgcacgca
gcacggatgcaggcggacggcacgtttcgaaacgtcgagggcggcacggtgctgcacgcg
cacccgagctcgctgctgtttgggcgcaaggcagactgggtcgtcttccatgaggtcatg
gagacgaatgacaagacctacatacgggaggtgagcaagacggaaaagggttggctgctg
gagtatgcgccagaattctaccaggtgacaatctacgcgtccaatgaattacatgacagc
gcctcgatggctgacaccaccatagctggcttgcgtctcttcccagaagttctctcccgc
tgcaagtattctttgtcagggcttcttccaaactgggccatacggccggcaagaagaata
tggccttcatag
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