Cordyceps militaris: CCM_09438
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Entry
CCM_09438 CDS
T03108
Name
(RefSeq) ATP-dependent RNA helicase dbp-2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cmt
Cordyceps militaris
Pathway
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_09438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_09438
03009 Ribosome biogenesis [BR:
cmt03009
]
CCM_09438
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCM_09438
Spliceosome [BR:
cmt03041
]
Complex A
U1 snRNP components
U1 related factors
CCM_09438
Complex B
CCM_09438
Ribosome biogenesis [BR:
cmt03009
]
Eukaryotic type
Pre-60S particles
Helicases
CCM_09438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
UTP25
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18171441
NCBI-ProteinID:
XP_006674635
UniProt:
G3JUA9
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MSNYGGDRGGRSGGYSGGGGGGGGRGGYGRDRDDRGDRNGGGYGGGGGGYGGGRSNGYSN
GGSNGFGGGGGGYGGGGGGYGGGGGGFGGGGGDRMSALGAGLRKQDWDFSTLPKFEKDFY
KVNSDVENRSDAEVEAFRAKHQMTIAGSAVPKPVETFDEAGFPRYVMDEVKAQGFPAPTA
IQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTREL
AVQIQQEITKFGRSSRIRNTCVYGGVPKGPQTRDLARGVEVCIATPGRLIDMLEAGKTNL
RRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRAMAADFLQDSIQ
VNIGSMELAANHRITQVVEVVTEMEKRDRMIKHLEKIMENKENKILIFVGTKRVADDITR
FLRQDGWPALSIHGDKQQNERDWVLDQFKTNKSPIMVATDVASRGIDVRNITHVLNYDYP
NNSEDYIHRIGRTGRAGATGTAITLFTTDNQKQARELVNVLQEAKQQIDPRLAEMARFGG
GGGGRGYGGWGRGGRGGGGGRGGNNANNMPLRNNRW
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactacggcggtgatcgcggcggtcgctctggcggctacagtggcggcggcggc
ggcggcggtggccgtggcggctacggacgtgatcgtgacgatcgcggcgaccgcaacggc
ggtggttatggtggtggcggtggtggctacggcggcggtcgcagcaacggctactccaac
ggcggctccaatggttttggcggcggcggtggtggttatggtggcggcggcggcggctat
ggcggcggtggtggtggtttcggcggaggcggcggtgaccgcatgtctgcgctgggtgcc
ggccttcgtaagcaggactgggacttctctaccctccccaagttcgaaaaggatttctac
aaggtgaacagcgatgttgagaaccgttctgacgccgaggtcgaagcctttcgcgcaaag
caccagatgaccattgctggtagcgccgtccccaaacccgtcgagacctttgacgaggct
ggcttcccccgctacgtaatggatgaagtcaaggcacagggcttccccgcccccactgcc
attcaatctcaaggttggcccatggccctttccggtcgcgatgttgtcggtattgccgag
actggctccggcaagactcttacctactgtctccccgccatcgttcacatcaacgcccaa
ccccttcttgctcctggcgacggtcccattgtcctggttctcgcccccacccgagaactc
gctgtccagattcagcaagagatcacaaagtttggtcgctcctcccgcatccgcaacact
tgcgtctacggtggtgtccccaagggccctcagacccgtgacctagctcgcggtgtcgag
gtctgcattgccactcccggtcgtctgattgacatgctcgaggctggcaagaccaacttg
cgccgtgttacctacctggttcttgacgaggctgatcgcatgcttgacatgggtttcgag
ccccagattcgcaagatcattgagcagattcgccccgaccgtcagactctcatgtggtct
gctacctggcccaaggaagtccgcgccatggctgccgatttcctccaggattccatccag
gtcaacattggttccatggaacttgctgccaaccacagaatcacccaggttgtcgaggtt
gtcaccgaaatggagaagcgtgatcgcatgatcaagcatcttgagaagatcatggaaaac
aaggagaacaagatcctcatctttgttggcaccaagcgtgttgccgacgacattacccga
ttccttcgccaagacggatggcccgcattgtcaattcacggtgacaagcagcaaaacgag
cgtgattgggtccttgaccagttcaagaccaacaagagccccatcatggtggccactgac
gtggcttcgcgtggtattgatgttcgtaacatcactcacgtgctcaactacgactacccc
aacaactcggaggattacatccaccgtattggtcgtaccggacgtgctggtgccactggc
actgccatcacactcttcaccactgacaaccagaagcaggctcgtgagcttgtcaacgtt
cttcaggaagcgaagcagcagattgaccctcgtctggctgagatggcccgcttcggcggc
ggcggcggcggccgtggctacggaggttggggacgtggtggtcgcggcggtggcggtggc
agaggtggtaacaacgccaacaacatgccgctacgcaacaatcgctggtaa
DBGET
integrated database retrieval system
