Cordyceps militaris: CCM_09506
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Entry
CCM_09506 CDS
T03108
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_09506
03009 Ribosome biogenesis [BR:
cmt03009
]
CCM_09506
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCM_09506
Spliceosome [BR:
cmt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CCM_09506
Ribosome biogenesis [BR:
cmt03009
]
Eukaryotic type
90S particles
Helicases
CCM_09506
Pre-60S particles
CCM_09506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
18171508
NCBI-ProteinID:
XP_006674702
UniProt:
G3JUT3
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MDHSIKKRKRKDAEDATPVKTNGADTIPKKSKKSRKPAPEEEEEQDEDDFEGFGGGQDDE
DDEEEPENEVENAEEQADDDQETTVADLPTDNAPVLPLATNLESFEELKLSDKTMQAIKE
MGFTKMTSIQKSVRPPDRPEQYMPMLTTKQAIPPLMAGKDVLGAAKTGSGKTLAFLIPAI
EILSSLRFKPRNGTGVIIVSPTRELALQIFGVARELMKHHSQTYGIVMGGANRNAEREKL
TKGVNLLVATPGRLLDHLTSTPFVYKNLKSLIIDEADRILEVGFEDEIRKIVQILSNDNR
QTMLFSATQTTKVEDLARISLRPGPLYINVDEEERFSTVDGLEQGYVLCDADRRFILLFS
FLRQMNQKKKKVIVFFSSCNSVKYYAELLNYIDCPVLDLHGKQKQQKRTNTFFEFSNAPN
GILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGAGKTGRSLLFLQPSEVG
FLSHLKAARVPVVEFEFPTRKIVNVQSQLEKLIGKNFYLQQSAKDAFKSYLHAYASHSLR
SVYDVNKLDLAKVGKGFGFPTPPRVDITLGGSMSRDRTQGRRAYGSQPSQKFNGKRR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatcactcaataaagaagcgcaagcgcaaagacgctgaggacgccactcctgtcaag
accaacggcgccgacactattcctaaaaagtcaaagaagtcaaggaagcctgcgcccgag
gaggaggaggagcaggacgaggacgattttgagggcttcggaggtggtcaagacgatgaa
gatgacgaagaagagccagaaaacgaggttgaaaatgctgaggaacaggccgacgacgac
caagagacgaccgttgccgatctcccgaccgacaatgctcccgtacttcctctggccacc
aacctcgaatccttcgaagagctgaagctgtcggacaagacaatgcaggccatcaaggag
atggggttcaccaaaatgaccagcatccaaaagagtgtacgccctcccgaccgacccgaa
caatacatgccaatgctaaccacaaaacaggctattccccccctcatggccggcaaggac
gtgctcggcgccgccaagacgggctccggcaaaacgctcgcctttctgatccccgccatc
gagatcctgtcctcgctgcgcttcaagccgcgcaacgggacgggcgtcatcatcgtgtcg
ccgacgcgcgaacttgcgctgcaaatctttggcgtcgcgcgcgagctcatgaagcaccac
tcgcagacgtacggcatcgtcatgggcggtgccaaccgcaacgccgagcgtgagaagctg
accaagggcgtcaacctgctcgtcgccacgccgggccgcctgctcgaccacctgacaagc
acgcccttcgtgtacaagaacctcaagtcgctcatcatcgatgaggcggaccgcattctc
gaggtcggtttcgaggacgagatccgcaagattgtccagatcctgagcaacgacaaccgc
cagacgatgctcttctcggccacgcagacgaccaaggtcgaggacctcgcccgcatctcg
ctgcggcctggccctctgtatattaatgtcgacgaggaggagcgcttcagcactgtcgac
ggcctggagcagggctacgtcttgtgcgacgcagacaggcgctttatcctgctattttcg
tttttgcgccagatgaaccagaagaagaagaaagtcatcgtcttcttcagcagctgcaac
tcggtcaagtactacgccgagctgctcaactacattgactgccccgtgctggacctgcac
ggcaagcaaaaacagcagaagcgcacaaacacgttcttcgaattcagcaacgcccccaac
ggtatcctcatctgcacagatgtcgccgcccgtggtctcgatatccccgccgtcgacttc
atcgtccagttcgacccgcccgacaacacgcgcgactacatccaccgcgtgggccgcacg
gcgcgcggcgccggcaagacgggccgcagtctgctcttcctgcagccgagcgaggtcggc
ttcctgtcgcacctcaaggcggcgcgcgtgcccgtcgtcgagtttgagtttcccacgcgc
aagattgtcaacgtgcagtcgcagctcgagaagctcatcggcaagaacttttacctgcag
cagagcgccaaggacgccttcaagtcgtacctgcacgcctacgccagccacagcctgcgc
tccgtctacgacgtcaacaagctcgacctcgccaaggtcggcaagggcttcggcttcccc
acgccgccgcgcgtcgacattacgcttggcgggtccatgagcagggaccgcacgcagggc
cggcgggcgtacggcagccagccgagtcaaaagttcaacggcaaacggcgctag
DBGET
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