Chlamydia muridarum Nigg: TC_0008
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Entry
TC_0008 CDS
T00028
Name
(GenBank) exodeoxyribonuclease V, gamma subunit, putative
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cmu
Chlamydia muridarum Nigg
Pathway
cmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TC_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmu03400
]
TC_0008
Enzymes [BR:
cmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TC_0008
DNA repair and recombination proteins [BR:
cmu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TC_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
AAF38901
UniProt:
Q9PLT7
LinkDB
All DBs
Position
complement(10885..13962)
Genome browser
AA seq
1025 aa
AA seq
DB search
MCNDQRLERSFPSNNTHECKPMNELSHSQATFSNYPEVLLAKLAQDLFSINQTPMTKRWI
LVPSSDTDHWLRRELVKASSNHIFMGTHIFASFDAFVKYLFTGTRLADLSTPDHITLPLN
IYNLLRESSFNSSSDVSYAHLQKLSSLFKKFYTFSQEPSTNNPYYKNLFTQLTNAYTPLE
TIFSSILAHPPKYPCSLHIFGYPQLPQHVASFFISLGKYFPVHFYCFSPSAAYFGDLLSD
KAMALLSHKIPEPQQETWEKYVLTDRLALLANLAHRSQSLQNFFLDYSVPYEELFQPYEN
NSSLNIVKDSFFHLRPIDQKLFADSPQTIFVRKAPSAAREVHQLFSIISQLLNSGVSTDE
IFIVSSNLSKYEPLLKGIFEPHIPLYLTKSEKSQTRDLKNKLLLLVAFLFSKCTLHDLLK
LLSYPDLRTPLETTKISFLTHKLSRYWKSLSQKDPLISQLIHHIFDEYPFIDDSGVVNES
ETWEIVVPLLDLLQQVITHYTDSKDKTYEEHSHLIFSTLENIFLLSTEEHALLVSLSKTL
QPFAHSSCSLTIFVEFCLDFLSHIPGYSQLYNQPGPFIGSINSLSLIPKGYTFILGANKK
NFSLDTSFLIDPSLIQEDFLFSSTEDEDNLHFLQTIVSTKHQLHISYLSSSKNPALPSSA
LKHLLDAVPIREENLSGKLYAKENFSSQSLHQSYQVYYRMAQADPIQNKAPSLFETASPK
PLPTHLSLKHLVKAFKDPLNFFLNTQHGLSFHPKSLFSKAEKVFPSPYDAKSFWDHQLAP
HSPLPTTNYLSSFTESLYTQTQDSIIQRVETLKKDPSTAPFSVVFSHQIFQEPSSPHDKY
VPPFPLSLHNQTISLQGEIRGVCSQGVYLFSMNPGDSFKKATKSHGLPKNSFELESCLEA
YLSLALLQASHILPKDSAILRVTPYDIEPITPPFSSPESYLILAVGLYEHLQNKAIPLPS
AQAWEYIKKTDVASKIIKKLLDNEEDPLTNSFWLFHNRDTEEICSELSKDLLSQLLSLFI
NQDTQ
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaacgaccaacgcctggaaagatcgtttcctagcaacaatactcatgaatgcaaa
ccgatgaatgaactatctcacagccaagcaacgtttagtaattatcctgaagttctatta
gctaaacttgctcaagatctgttctctatcaaccaaactcccatgacaaaacgatggatt
ctggtgccgagctcagacacagatcactggttacgaagagaattggtaaaggcttcatcc
aatcacatcttcatggggacacatatttttgcttctttcgatgcttttgtcaaatactta
tttacgggaactcgtcttgcagatctctctaccccagatcatattaccctccctctaaat
atttataaccttttgagagagtcctcttttaactcatcctcggacgtttcctatgctcat
ttacaaaaactttcttcactctttaaaaagttttacacattttctcaggagccatcgact
aacaatccttattacaaaaacttgtttacgcaactcacaaacgcatatactcccttagaa
acgattttttcttctattttggctcatcctccaaaatatccctgctccctgcatattttt
ggatatcctcagctccctcagcacgtggcctcttttttcatttctctagggaaatatttc
cctgtgcatttttactgtttttcaccgagtgccgcctattttggggatcttttatccgat
aaagccatggccctcctctcccacaaaatcccagaaccccaacaggagacatgggaaaaa
tatgtattaacagatcgactggctttgctggctaatcttgcgcatcgatctcagtcttta
caaaatttctttttagattatagcgtcccctacgaagaactttttcagccatacgaaaac
aactcctccctaaacattgtaaaagatagttttttccatttacgtcccatagaccagaag
ctgtttgctgattcacctcaaaccatttttgtacgtaaagctccttcagcagctcgagaa
gttcatcaactattttccatcatttctcaacttctaaactctggggtctctacagatgaa
atatttatcgtttcttccaacctatcaaaatatgaacctcttctaaaaggcatctttgag
ccgcatattcctttatatttaacaaaatcagaaaaatctcagacccgagatctaaaaaac
aaactattattactggtagcgtttttgttctctaaatgcactctgcatgatttactaaag
ctcctttcctatccagaccttcgcacccctttagaaacaacgaaaatcagtttcctcacc
cacaaactgtctcgttactggaaatctttgtcacaaaaagacccccttatttcccaactc
atccaccacattttcgatgaatatccattcattgatgactcaggagtcgtaaatgaatcc
gaaacttgggaaatcgttgttcctctgcttgacttattacaacaagtaatcactcattac
acagactcaaaagacaagacctatgaggagcactctcaccttatcttttctaccctagaa
aacatcttccttctttctacagaagaacatgctttgctagtttcattatccaaaacttta
caaccttttgcgcactcttcttgttcgttaacgattttcgtagaattttgcttagatttc
ctatcacatattcctggatacagtcagttatacaatcaaccaggaccttttattgggtcc
ataaacagtctcagcctaattccaaaaggctatacgtttattcttggggctaacaaaaag
aatttctctttggacacaagtttccttatagatccttctctcatacaggaagattttctc
ttttcttcaacggaagatgaggacaaccttcactttctacaaaccattgtttctacaaaa
caccagcttcatatcagctatctctcttcttcaaaaaatcctgcattacccagctctgct
cttaaacatttattagatgctgtacctattcgagaagagaatctttctggaaagctctat
gcaaaagaaaatttttcttcccaatcattacatcaatcttatcaagtttactaccgaatg
gctcaagctgatccgatacagaacaaagcgccttcgctttttgaaactgctagcccaaaa
cctttgccaacacatctatctctaaaacatcttgtaaaagcttttaaagatcctcttaac
ttctttcttaacacccaacacggtctttcgtttcatcccaaatctttgttttcaaaagca
gagaaagtgttccctagtccatatgatgcgaaatctttttgggatcatcagctggcgcct
cactctccgcttcctactactaactacctctcttcttttacagaatcgctatatactcaa
acacaagactcgataatccaacgtgtggaaaccctgaaaaaagatccctcaacagcccct
ttttctgttgtattttctcatcagattttccaagaaccgagcagtcctcacgataagtat
gttcccccctttcccctctccctccataaccaaaccatttcccttcaaggagagattcgt
ggggtgtgctcacaaggagtgtatttattttctatgaatccaggagactcttttaagaaa
gcaaccaaatcccatggtctccctaaaaactcttttgaactagaatcctgtctagaggcc
tatttatccttagcactactccaagcttcacacattcttcccaaagactctgcaatacta
cgagtcacgccttacgacatagaacccataacccctcctttttcttctccagaatcctat
ctaatccttgcggttggcctatatgaacatctgcaaaacaaagctatcccccttccttct
gctcaggcctgggagtacattaagaaaacagatgtggcttcgaaaattattaaaaaactt
ttagataatgaagaagatcccttaaccaatagcttttggttattccataaccgagatacg
gaagagatttgctcagagctttccaaagatctgctctctcaactcctctctctctttata
aatcaggatactcaatag
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