Chlamydia muridarum Nigg: TC_0012
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Entry
TC_0012 CDS
T00028
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cmu
Chlamydia muridarum Nigg
Brite
KEGG Orthology (KO) [BR:
cmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmu03032
]
TC_0012 (topA)
03400 DNA repair and recombination proteins [BR:
cmu03400
]
TC_0012 (topA)
Enzymes [BR:
cmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TC_0012 (topA)
DNA replication proteins [BR:
cmu03032
]
Prokaryotic type
DNA Topoisomerases
TC_0012 (topA)
DNA repair and recombination proteins [BR:
cmu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TC_0012 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
SWIB
Toprim
DUF4914
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AAF38905
UniProt:
Q9PLT3
LinkDB
All DBs
Position
17361..19958
Genome browser
AA seq
865 aa
AA seq
DB search
MKKSLIIVESPAKIKTLRKLLGEGFIFDSSLGHIVDLPAKGFGIDIEKGFIPDYQILEGK
EEVIRKICAEAKKCDVVYLAPDPDREGEAIAWHIANQLPKNTKIQRISFNAITKGAVTEA
LKHPREIDMALVNAQQARRFLDRIVGYKISPILGRKLQRWSGVSAGRVQSVALKLVVDRE
YAIEQFVPVEFWNIRVNLQDPKSQKTFWAHLHSVNGKKWEKEIPEGKSSEDVVLIDSKEK
ADDLVSLLESATYCVDRVESKEKKRNAYPPFITSTLQQEASRHYRFSSSRTMNIAQTLYE
GVDLDSQGAVGLITYMRTDSVRTDPEAIKQVRKYIENHFGKEYVPSSPNMYATKKMAQDA
HEAIRPTDVSLSPESIRTKLTEDQYKLYSLIWKRFVASQMIAAIYDTLAIQIATNKGIDL
RATGSCLKFKGFLAVYEEKRDEEGDEDENIQLPKLHERDELKKEEIEAEQSHTKPLPRFT
EASLVKELEKSGIGRPSTYATIMNKIQSREYTLKEGQRLRPTELGKVVCQFLETNFPRIM
DIGFTAKMEDELELIADNKKPWKQLLQEFCELFLPFVVTAEKEAFIPRIVTEMDCPRCHK
GKLVKIWSKNRYFFGCSEYPTCDYKTSEEELTFDKSEYADDTPWDAPCALCGGQMKVRHG
KFGSFLGCENYPQCHYIVNLFKKGEAGSEPEEIVSCPAEGCTGHLVKRRSRFNKMFYSCS
EYPACSVIGNSVDAVIEKYTGTPKTPYEKKIKAKKATASKKGKATKGKASTTKTKKKSTV
TTKNRKTATYTPSSALAAVIGPDPIDGFPEATKKIWAYIKEQGLQSPNNKRVIVPDSKMK
HVIGDDPIDMFALSKKIQAHLTKQE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatccttaatcatcgttgagtccccagctaagatcaaaaccttacgaaaattg
ttaggagaagggtttattttcgactcttctttgggtcatattgtagatcttccagcaaaa
gggtttggtattgatatcgaaaaaggatttattccggactaccaaattctagaggggaag
gaagaggttattcggaaaatttgtgctgaagccaagaaatgcgacgttgtttatcttgct
cccgatccagaccgagagggggaggctatagcatggcatattgccaatcagttgcctaag
aataccaaaattcagagaatttcttttaatgcgatcactaaaggggctgttacagaagcg
ttgaagcatccccgagaaattgatatggcgttggttaatgctcagcaggcgagacgtttt
ttagatcgcatagtggggtataaaatttctccaatcttgggtcgcaagttgcagcgatgg
tcgggagtatctgcaggaagagtgcagtctgtagctttgaaattagttgtagatcgagaa
tacgccatagaacaatttgttcctgtagagttttggaatattcgcgttaatctccaagat
cctaaaagtcagaaaacgttttgggcgcatttacattctgtaaatggaaaaaaatgggaa
aaagaaattccagaggggaagtcttctgaagacgtagtcttaattgattctaaagaaaaa
gcggatgatttagtttccctattagaatcagcaacttattgcgtagatcgcgttgaatct
aaagagaaaaagcgcaacgcatatcctccatttattacttctacgttacagcaggaagcc
agtcgacattatcgtttttcttcctctagaacgatgaatatcgctcaaactttatacgaa
ggggtggatttagatagtcaaggcgctgtgggattaattacttacatgagaaccgattcc
gttcggacagatcctgaagctatcaaacaggtgcgtaagtatatagagaaccattttgga
aaagaatatgtgccttcttctccaaatatgtatgccacgaagaaaatggctcaggatgct
catgaggctatacgtcctacagatgtttctctttctcccgaatccatacgtacaaagtta
acagaagatcagtacaaactttactctttgatatggaagcgttttgtagcttcacaaatg
attgcggccatctatgatactcttgccattcaaatagcgacaaataaaggcatagatctc
cgggctacaggttcttgcttaaagtttaaggggtttttagctgtctatgaagagaaaaga
gatgaagaaggagatgaggatgagaatattcagcttcctaagctccatgagcgtgatgag
ctaaaaaaagaggaaatagaagctgaacaatcgcatactaaacctctaccgcgtttcaca
gaggcctctttagttaaggaattagaaaaatctggcataggaagaccttctacttatgct
acgattatgaataaaattcagagtcgggaatatacattaaaagaaggccaacgattacgt
cctaccgagcttggaaaggtagtttgtcaatttttagagacgaatttccctcggattatg
gacattggttttacggctaaaatggaagatgagctagagcttatcgctgataataaaaag
ccttggaaacagctgttacaagaattttgtgaattattccttccttttgtagtgacggct
gaaaaagaagcttttattcctcgtattgtcacagaaatggactgtccaagatgtcataaa
gggaaactagtaaaaatttggtctaaaaatcgatacttctttggttgttcggaataccct
acctgtgattacaaaacttcggaagaagagctcactttcgataaaagcgagtatgcagac
gatactccttgggatgctccttgcgctctttgtggggggcaaatgaaagtgcgacatggg
aagtttggaagctttctcgggtgcgagaattacccacaatgtcattatattgtgaatctt
tttaaaaaaggagaagctggctcagagcctgaagagatcgtatcatgtcctgcagaaggc
tgtactggtcatctcgttaaaagaagatcgcggtttaataaaatgttttattcctgttca
gagtatcctgcgtgcagcgttattgggaactctgtagatgcagtcattgaaaaatataca
ggaactcctaaaactccttatgagaagaagataaaagctaaaaaagcaacagcttctaaa
aagggaaaagcaacaaaaggaaaggcttctactacgaaaacaaagaaaaaatctactgta
acgacgaaaaacagaaagactgcaacctatacaccttcttctgctttagctgctgttatt
ggtcctgacccaatagatggtttccccgaagctacgaaaaaaatctgggcgtatatcaaa
gagcagggattgcaatcgccgaataacaaaagagtcattgtccctgatagcaaaatgaag
catgtaatcggtgatgatccgattgatatgttcgcactatctaaaaaaatacaagcgcat
ttaacgaagcaagagtaa
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