Chlamydia muridarum Nigg: TC_0081
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Entry
TC_0081 CDS
T00028
Name
(GenBank) helicase, Snf2 family
Organism
cmu
Chlamydia muridarum Nigg
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
ERCC3_RAD25_C
Bile_Hydr_Trans
DUF693
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AAF73530
UniProt:
Q9PLL8
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Position
94564..98109
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AA seq
1181 aa
AA seq
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MQTGTSNRSVNPLCFRGEMLNFRKLRRDFTANILQDGKELFTQGAVVSAKILSMNSETVC
ISAQIRGSYDNVYECEIEVDRAESDTIDSNCDCSYNYDCQHIVALLFYLEQYFNEMVVTY
SKEAGLSSNEEVSKELQETFVVAATREEERRDREHQKEILREYNHAANVLSENPFFLPLE
YSEKDSAELAVLFVPQKNEKEVFSPNQPIEFQLVLRLPGRSKPFYISNIKTFLEGVLYQE
PIVFSGRRFFFTLQSFSASDRKLIDLLIRYARYATGNAEEKLLKSAFLTPASLGMILSKM
LEHQMAESGGVKLGERECFQGIFCGNLEEPLFWSVSPAKMKFHLDYFDTPYKALLMKPLV
VVDEEEIQPEHAVLLESNCPGIIHKNVYHHFLPQIKRAHIRTFAGLRDVAIPEALFGSFC
ENALPVFRDYAELSNIEALNVFSTLPYTEELRGVCDISYLDGELEAKLFFLYDGQRVPAT
SFSLQYQDVRAFVRPDGILARNLVEERKILEEVFAGFIYDERDGAFHVKSEKKIVEFMTE
TIPNNQHRITFNCPETLSDQFIYDETVFDLTFRAGADINYYEAELKVHGLLKGISLDLLW
DCISAKKRFLELPKKGCQLKKARRGKAQASKLPCILVLDLEKIAPVIQIFNEIGFQVLDD
FVEKCPLWSLSGISSASFKNLPVNFSMTEDLAEIQKQIRGEVDFEFQEVPSQIQATLRSY
QKDGVHWLERLRKMHLNGILADDMGLGKTLQTIIAVTQSRLEKGGGCSLIICPTSLVYNW
KEEFRKFNPEFKTLVIDGIPSQRRKQLSSLEEYDVAITSYNLLQKDIDIYKDFLFDYVVL
DEAHHIKNRTTRNAKSVKMIRACHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVG
KYIRIGNYMGNKADNVEALRRKVAPFILRRMKEDVLEDLPPVSEILYHCHLTESQRELYQ
SYAASARQELSRLVKQEGFERIHIHVLATLTRLKQICCHPAIFAKDTPEPGDSAKYDMLM
DLLGSLVDSGHKTVVFSQYTKMLGIIKQDLEAKGVPFVYLDGSTKNRLEIVQQFNEDPSL
LVFLVSLKAGGTGLNLVGADTVIHYDMWWNPAVENQATDRVHRIGQSRSVSSYKLVTLNT
IEEKILSLQNRKKGLVKKVINSDDEVVSKLTWEEVLELLQI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaggtacaagtaacaggtctgtgaaccccctatgctttagaggagaaatgctt
aattttcgtaaattaagaagagattttacagctaacatattgcaagacggaaaagagtta
tttactcaaggcgctgtggttagtgcaaaaatcttgtccatgaatagcgagacagtgtgt
attagtgcacaaattcgaggttcatacgacaatgtttacgagtgcgaaattgaagtagat
cgagcggaatctgatactatagattctaactgcgattgttcttacaattatgactgtcag
catatcgtagccttactattttatttggagcagtactttaatgaaatggtggttacctac
tccaaggaggcaggtctttcttctaatgaggaagtgagcaaggagttgcaagaaactttt
gttgtagcggcgacgcgggaagaggagcgtagagatcgcgaacatcaaaaagagatcctt
cgagaatataatcacgctgctaatgtattaagtgaaaatcctttcttcttacctctagaa
tattctgagaaagatagcgcagagctcgcagttttgttcgttcctcaaaaaaatgaaaaa
gaagttttttctcccaatcagcctatagaatttcagctcgttttgcgtcttccagggcgt
tccaaacctttttacatttctaatatcaagacttttctagaaggggtgttgtatcaagag
cccatagttttcagtggaagacgcttcttctttactctgcaatctttcagtgcatcggat
aggaagctcattgatttactgattcgttatgcacgttatgctacggggaatgcagaagaa
aaattattgaaatcggcctttttgactccagcatctttaggaatgattttatctaaaatg
ttggaacatcaaatggcggaaagtggaggggttaagttaggagagcgagagtgttttcag
gggattttttgtggtaatttagaagaacctctgttttggtctgtatctccagctaagatg
aagtttcatttggattattttgatactccttacaaagctttattaatgaaacctctagtt
gtagtggatgaggaagagatccagccagagcacgcggtgcttttggagtcgaattgtccc
ggcatcattcacaagaatgtgtatcatcatttcttgccccagatcaagcgtgcgcacata
agaacttttgcaggattacgtgatgtagccattccggaagctctttttggttctttttgt
gaaaatgccttgccggtgttccgagattacgcggaattgtccaatatcgaagctttaaat
gttttcagtacgttaccctacacagaagaattacgaggagtctgtgatatcagctatctg
gatggagagctcgaggcgaagctctttttcctatacgatgggcaaagggtgcctgctacc
tcgttttctttgcagtaccaagacgtgcgtgcttttgtccgacctgatgggattttagct
cgaaacttagttgaagagagaaaaattttagaagaggtgtttgcgggatttatttacgac
gaacgcgatggggcattccatgtaaaaagtgagaagaagatcgttgaattcatgacagaa
acgatccctaataatcagcatcgaattacgtttaattgcccagaaactctttcggatcaa
tttatctatgatgaaaccgtatttgatcttactttcagagcgggagcagatattaactat
tacgaagcagagttaaaagttcatgggttattgaaaggaatcagcttggacttgctgtgg
gattgcatcagtgcgaaaaaacgattcttagagttgcctaagaagggctgtcagttgaag
aaggctcgtcgaggaaaagcccaagcttcgaagctcccttgtattcttgtcctggattta
gagaagattgctcctgttattcaaattttcaatgaaatcggtttccaggttttagatgat
tttgtagaaaaatgtcctttatggagtttatctggtatttcctctgcatctttcaaaaat
cttccagttaacttttctatgacggaagatcttgctgagatacagaagcagattcgtggg
gaagttgattttgaattccaagaggtcccttctcaaattcaagcaactttacgatcctat
cagaaagatggggtgcattggttagagcgtttgcgtaaaatgcaccttaacggcatcctc
gcggatgacatgggattagggaaaacattacaaacgattattgctgttacgcaaagtcga
ttggaaaaaggcggtgggtgttctttaatcatttgcccaacgtctttggtatataactgg
aaagaagagtttcgaaaatttaatccagaatttaaaacgttggtaattgatggtattcca
tcacaacgacgcaaacagttatcttctttagaagaatatgatgttgctattacttcttac
aatttactacaaaaagatatcgatatttataaagacttcctctttgattacgttgtactc
gatgaagcgcatcatattaagaatcgcaccacgcgtaatgctaaatcagtaaaaatgatt
cgagcttgtcaccgcttgattcttacaggaactccaatcgaaaattcgctagaagaacta
tggagtctgtttgacttcctcatgccaggacttcttagtagttatgatcgctttgttggt
aagtacatccgtattggcaactacatggggaacaaggcggacaatgtggaggctttaaga
agaaaagtcgctccatttattcttcgtagaatgaaagaggatgtcttagaagatctgcct
ccagtttctgaaattctgtatcattgtcatctcaccgaatctcaaagggaattgtatcag
tcttacgcggcctcagctcggcaagagttgtctcgtttagtgaaacaagaaggatttgag
agaattcatattcatgtgttggctacgcttacacgcttaaaacagatttgttgtcatcca
gcaatttttgcgaaagatactccagaaccaggagattctgcaaaatacgatatgttaatg
gatctattaggttcgctagtagattctggacacaagactgttgtgtttagtcagtacact
aagatgctagggatcataaaacaagatttagaagcaaaaggggtgccttttgtgtatctt
gatggttccaccaagaacagattagagatagttcaacagtttaatgaagatcctagttta
ctcgttttcttagtttctttaaaagctggtggaacaggattgaacttggttggagctgat
acagtgatccattatgatatgtggtggaatccagctgttgagaatcaagcaaccgatagg
gtacatcgtattggccagagtcgctcggtctcttcctataagctagttacgttaaataca
atcgaagaaaagatcttgagtttgcagaacaggaaaaagggtcttgtaaagaaagtgatc
aattctgatgatgaagtcgtttctaagttaacttgggaagaagtgctcgaacttctacag
atatag
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