Chlamydia muridarum Nigg: TC_0605
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Entry
TC_0605 CDS
T00028
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cmu
Chlamydia muridarum Nigg
Pathway
cmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TC_0605 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmu03400
]
TC_0605 (xseA)
Enzymes [BR:
cmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TC_0605 (xseA)
DNA repair and recombination proteins [BR:
cmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TC_0605 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
DUF1993
PPS_PS
HI0933_like
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
AAF39436
UniProt:
Q9PK65
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All DBs
Position
724412..725962
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AA seq
516 aa
AA seq
DB search
MSITSPPVEVSVLTDSIKNLLEKNFLRVVVKGELSNVSLQTSGHLYFAIKDSKAVLNGAF
FHFRSKYFDRRPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA
AEGYFDPKRKRQIPSEARTIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGPTAA
QEISRAIQVFNQENIKIDTLIVARGGGSIEDLWAFNEEILVKAIAASSIPIISAVGHETD
FTLCDFAADVRAPTPSAAAEIVCKSSEQYHQELQNLLRHLSSHSRQFIAAKKNLLSHWKK
HLATADFYHTAQQTLDYTRLSLERTLDAKLEHYKQHLAQYKRWLKSDILIRVEKHLSNLN
QALESAIKNKLYSNKVSLHQLYTSRFKNELPNLQHRTQHAKHLLNQLSRRLHFVMANSQE
TKLQRFARLQEEFSFMIQHLLTKAKERCQSVQEQMASLNPKNVLKRGFAQLFDFNKHSVI
ISAESLKQSDLVRVCLQDGEAVLSVKEVWLNNDKKG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataacatctcctcctgtagaagtctctgtccttacagattctattaagaatctt
ttagaaaaaaattttcttcgggtagtggttaaaggagaactcagcaacgtctctttgcaa
acgagtggacacctttactttgctatcaaagatagtaaggctgttctcaatggagccttt
tttcatttccgcagcaaatactttgatcgtaggcccaaagacggagattacgtgattctt
cacgggaaactcaccgtctatgctcctagaggtcaatatcaaatcgtagcctatgccctt
accttctctggggaaggcaatttgctacaacaattcgaagaacgtaaacaacgtctcgct
gcggaaggatatttcgatcccaaacgtaagcgtcagattccttctgaagctagaacaata
ggggtcatcacaagccctacaggagctgtcattcaggatattttacgagttctttctcga
cgctgtcaccaatttcaagtgatcctatacccagtcactgtacaaggtcctactgctgct
caagaaatttctcgagccattcaagttttcaatcaagaaaacattaaaatcgacacgctc
attgttgccaggggtggtggtagcatcgaagatctttgggcctttaatgaagaaatccta
gtcaaagctattgcagcaagttctatccctattatttctgctgttggtcatgaaaccgat
tttactctttgtgactttgctgcagatgttcgcgcaccaaccccctcggctgcagcagaa
attgtatgtaaaagcagtgaacaatatcaccaagagcttcaaaatttacttcgacatctc
tcatcccactcgagacaatttattgctgcaaaaaagaatcttctctctcattggaaaaag
catcttgctacagcagatttttaccatacagcacaacaaactttggattacacccgacta
tccttagaaagaactctagatgctaaactcgaacattataaacagcatctcgcacaatat
aagcgttggctaaagagcgatatcctaatccgtgtagaaaaacacctgtctaatctcaat
caagctcttgaatcagctattaaaaataaactttattctaataaagtctctttacatcag
ctatatacttctcgtttcaaaaatgaattacctaatttacaacatcgcactcaacacgca
aaacatcttttaaaccaactttctcgtagattgcactttgtaatggcaaactcacaagaa
acgaaattacaaaggtttgctcgcttacaagaagaattttctttcatgatacagcacctt
ttaaccaaagctaaggaacgctgccagtccgtacaagaacagatggcctctctgaatcca
aaaaatgttttgaaaagaggttttgcccagctctttgactttaataaacactctgttatc
atttcagctgaatctcttaagcaaagcgatcttgtgcgggtctgcctccaagacggtgaa
gcagttttatcagtaaaagaagtttggctgaacaatgacaaaaaaggctaa
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