Chlamydia muridarum Nigg: TC_0778
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Entry
TC_0778 CDS
T00028
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cmu
Chlamydia muridarum Nigg
Pathway
cmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TC_0778 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmu03021
]
TC_0778 (rho)
03019 Messenger RNA biogenesis [BR:
cmu03019
]
TC_0778 (rho)
Transcription machinery [BR:
cmu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TC_0778 (rho)
Messenger RNA biogenesis [BR:
cmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TC_0778 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
AAA_22
OB_RNB
Mor
AAA
nSTAND_NTPase5
NACHT
DUF5855
Motif
Other DBs
NCBI-ProteinID:
AAF39581
UniProt:
Q9PJQ0
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All DBs
Position
complement(919008..920267)
Genome browser
AA seq
419 aa
AA seq
DB search
MAVTKIAKLQRMGINELNVLARQYGVKNVGSLTKSQVVFEIVKAKSERPDEFLIGEGVLE
VLPDGFGFLRSPTYNYLPSAEDIYVSPAQIRRFDLKKGDTIVGTIRSPKEKEKYFALLKV
DKINGSTPDKAKERVLFENLTPLHPNERLIMEMGKENLAERVLDLTAPIGKGQRGLIVAP
PRSGKTVILQSIAHAIAVNNPDAELIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPDRH
IQVAEMVIEKARRLVEHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKR
FFGAARNIEGGGSLTILATALIDTGSRMDEVIFEEFKGTGNMELVLDRHLSDRRIYPAID
LIKSGTRKEELLYHPGELEKVRLFRQAIAGLTAIDAMQLLLGRLKKTNSNTEFLLSLKD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtgacaaagattgctaaactacaacgcatgggcattaatgagctgaatgtttta
gcgcggcaatatggggtgaagaatgtaggttccctgacgaaatcgcaggtagtgttcgaa
atcgttaaagctaagtctgaacgtcctgatgagtttttgattggtgagggagttttagaa
gttctcccagatggctttgggtttctgagatctcctacatacaactatcttccttctgca
gaggatatttatgtttctccagcgcagattcgtcgttttgatttgaagaaaggagatact
atcgttggaacgatccgttctcctaaggagaaagagaagtattttgctttattgaaagta
gataaaatcaacggttcgactcccgataaagcgaaagaaagagttttatttgagaactta
accccactgcatcctaatgagcggttaatcatggagatggggaaagaaaacctggcggag
cgtgtattggatttaacagctccaattggtaagggacaacgagggctgattgtggctccg
cctcgttccgggaaaacagtgattttgcagagtattgcgcacgccattgctgtaaataat
cctgatgcagagctcattgtattactgattgatgagcgtcctgaagaagttactgatatg
attcgtcaggttcgaggtgaagttgttgcatcgacttttgatgaacagcctgatcgacat
attcaagttgctgaaatggtaattgaaaaggcaagacgtttagttgagcacggtaaagat
gttgtgattttactagattctattacgcgtttagctcgtgcatataacactgtgcaacca
cattcaggaaaaatcctcactggaggggtagatgccagtgccttacataaacctaagcgt
ttctttggtgcggctagaaatattgaaggtggtgggtctctaacgattttagccacagcg
ttaattgatacggggtcaagaatggatgaggtgatctttgaggaattcaaaggaaccgga
aacatggaattagttcttgatcggcacctttctgatcgtagaatttatcctgctattgat
ttgattaagagcggaacacgaaaagaagaattgctataccatccaggagagttagagaaa
gtgcggctgttccggcaggctatagctggcttaacagcaatagatgcaatgcagttgctt
cttggtcggttgaaaaagacaaatagcaacacagagtttctattgtcattaaaggattaa
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