Chlamydia muridarum Nigg: TC_0875
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Entry
TC_0875 CDS
T00028
Symbol
uvrB
Name
(GenBank) excinuclease ABC, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cmu
Chlamydia muridarum Nigg
Pathway
cmu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TC_0875 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmu03400
]
TC_0875 (uvrB)
DNA repair and recombination proteins [BR:
cmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TC_0875 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TC_0875 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB
Helicase_C
UvrB_inter
ResIII
DEAD
UVR
AAA_22
AAA_30
Kinesin
Microtub_bd
SWI2_SNF2
UB2H
Motif
Other DBs
NCBI-ProteinID:
AAF39671
UniProt:
Q9PJF4
LinkDB
All DBs
Position
1012726..1014756
Genome browser
AA seq
676 aa
AA seq
DB search
MTHYHNPLNGRKVLNQQFVLQAPFLPCGDQPEAIRQLSRGILDGIPSQVLLGTTGSGKTF
TMANVIANVNVPTLVLAHNKTLAAQLYQEFKAFFPENAVEYFISYYDYYQPEAYIARSDT
YIEKSLLINDEIDKLRLSATRSILERRDTLIVSSISCIYGIGSPDNYSSMALILEVGKEY
PRSQLSAQLVRMHYQASASPQRSAFRERGSVIDIFLAYESDLAVRLEFVNDTLVSIEYTD
PLTMIPSHTVPSVTLYPGSHYVTPEAVREQAIRTIREELEQRLLFFEGRPVEQERLFQRT
THDIEMIKEIGFCKGIENYSRHFTGAAPGEPPTCLLDYFPEDFLLIIDESHQTLPQLRAM
YRGDQSRKQSLVEYGFRLPSAFDNRPLTYEEARRYFRRVVYVSATPGELEVQESRGHIIE
QIIRPTGIPDPLPEIRPATGQIDDLLEEIRQRLRKDQEKILVVSVTKKLAEDIAAFLAEL
GIAAAYLHSGIETAERTQILTDLRLGTIDVLIGVNLLREGIDLPEVSLVAILDADKEGFL
RSSASLIQFCGRAARNVHGKVIFYADRITPSMDHMLKETERRRQIQLDYNKKHNITPKPI
IKPILANPITKEGAQEDSRPETQSTEDLESSIKQYEEAMYKAAQDFQFDEAAKYRDLMNA
AKRQLLFKQGEDGNSK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattaccataatcctttgaatgggaggaaagttctgaatcagcagtttgtatta
caagcccctttcctcccttgtggagatcagcctgaggcaattcgtcagctttctcgagga
attttagatgggattccctcacaggttcttctaggaaccactggatctggaaagacattt
accatggcgaacgtaattgccaacgtcaatgtccctaccttagtactcgcgcataataaa
acactggccgctcagttgtaccaagaatttaaagcattctttcctgaaaatgctgttgaa
tactttatttcctattacgattactaccaacccgaagcttatattgcgcgtagcgatacc
tatatcgaaaaaagcctgctcatcaatgacgaaattgacaaacttcgcctttctgcgacg
cgatctattttagaacgaagggatactttaatcgtctcctctatttcttgtatttacggc
attggctctcccgacaactactcttctatggctcttatattagaagttggaaaagaatat
cctcgttcccagctctctgcccaactcgtacgcatgcactatcaagcttctgcctcccct
caacgcagtgcctttcgcgaacgaggtagcgtcatagatattttccttgcttatgaaagt
gatcttgccgttcggcttgaattcgtcaacgatacacttgtttccatagaatatacagat
ccgttgaccatgatcccctctcatacggtcccgtccgttactctttatcctggatctcac
tacgttactcccgaagcagttcgtgaacaagccattcgtaccatccgcgaagaattagag
cagcgtctgctgttttttgaaggacggcctgtagaacaagaaagactatttcaacgcacc
acgcacgatatagaaatgatcaaggaaatcgggttctgtaaagggattgaaaattactcg
agacactttactggagcagctccaggagaacctccaacttgtcttcttgactatttccca
gaagatttccttttaatcatcgatgagtcccaccagacacttcctcagttgcgtgccatg
tatcgcggagatcaatctcgcaaacagtctcttgttgaatatggattccgtcttccctct
gcttttgataatagaccgcttacttatgaggaagctcggcgatattttcgtcgcgtagtt
tatgtatcggctactcctggagaactcgaagtccaagaaagccgaggacatatcatagaa
caaatcattcgtcctacagggattcctgatccactgccagaaattcgcccagcgacagga
cagatagatgacctcttagaagaaattcgtcagagacttcgcaaagatcaagaaaaaata
ttagtcgtctctgtcacaaaaaaattagctgaagacatcgcagccttcttagctgaactg
ggaatcgctgccgcctatcttcattcaggtattgaaaccgcagaaaggacacaaattctt
acagatttacggttaggaacgatagatgttcttattggagtaaaccttcttcgagaagga
atcgatttacccgaagtgtcattagtcgcgattcttgacgcagataaagaaggttttcta
cgtagtagcgcctcccttattcaattctgcggacgagccgcacgcaatgtccatggaaaa
gtcattttttatgccgaccgcatcaccccttccatggatcatatgctcaaagaaacagaa
cgacgcagacaaatacaactcgattacaataaaaaacataatatcacccctaagcccatt
attaaacccatcttagctaaccccattactaaagagggcgctcaagaagattcccgtcca
gaaacccaatctactgaagatctcgaatcttctatcaagcaatacgaagaagcgatgtat
aaagctgctcaagattttcagtttgatgaagcagccaagtaccgtgatttgatgaatgcg
gcgaaacgccaactgctttttaaacaaggagaggatggaaattcaaaatga
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