Citricoccus muralis: P8192_05135
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Entry
P8192_05135 CDS
T08998
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cmua
Citricoccus muralis
Brite
KEGG Orthology (KO) [BR:
cmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmua03019
]
P8192_05135 (hrpB)
Enzymes [BR:
cmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
P8192_05135 (hrpB)
Messenger RNA biogenesis [BR:
cmua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
P8192_05135 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
ResIII
DUF6484
Motif
Other DBs
NCBI-ProteinID:
WFP17493
LinkDB
All DBs
Position
complement(1120050..1122803)
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AA seq
917 aa
AA seq
DB search
MTNTPAAHQPADSWEIPWERIVQGLPAARLVPQLTGLAGCELAEQAELTAPGTDSGAGTA
GIRVVISAPPGSGKTTVVPPALAAVSAGRVVVTQPRRMAARAAARRLVSLSGAQLGREVG
YTVRGDRHVSAATRVEFVTTGVLLRRLIADPEASGIGAIVLDEVHERHLDTDLTFALVEQ
LGQLRPDLHVVVMSATLDVGHWAELLGARVLEVATEPHPLQEIWAPWGTQAQRSLDARGV
APGFLDHVADVVVEYQHLHQFPRTPVGPDRPGDTLVFLPGAREIDRVAARLGSDPRLAPD
TAVLPLLGSMPAREQDRILARSTDTASQFPRRIVLATNVAESALTVPGVRLVVDAGLDRA
LREDSRRGVSGLITLGASKSAMVQRGGRAAREAPGTVVRCLSEAEYAARPAHTAPEIRTA
GRNELGRALLDVACWGAPRGAGLRLPDPFPTAAADRAEQRLQELGAVHDDGTPTELGARM
SRLPVDPHLGRALLDGAELWDARVAAEAVATLAADTRAPGADLMARYRQLRSDPGWRHDV
DRLARAAVVAEDRAPQSQGHDDARGPLDQHHLHHDALGLITALAYPQQIARRRDAEYLLA
SGTAARLPASSSLIGAEWIAVAELSLHGDHAVIRAAVELDPEHAELAAGPLLVDETVARF
DAASDTHRRVTARRIRRLGAIELSSTPVPPQPEHARSAVVAEWRETGVLALMQRAGASVT
TLRNRLGFLHRVYGAPWPEVTDAALTATVEDWLGPEIDQLAAGAAERSLDLHSALRRLLP
WPEAARFDELAPLRLTVPSGSQITLDWPAPEDHPSQNNPDADTPAPPVLAVKLQECFGWR
TGPTVAEGRVPVLLHLLSPAGRPLAVTSDLNSFWENAYPAVRAENRARYAKHPWPEDPWT
AVATSRTNSAMRRIPPS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacacacccgccgcgcaccaacccgccgattcctgggagatcccatgggaacgg
atcgttcaggggctgcccgcggcccgcctggtgccgcaactgactgggctggccggatgt
gagttggccgagcaggctgagctcaccgcgccaggaacagactccggtgccggaacggcg
ggcatccgagtcgtgatttccgcgccgcccggtagcggcaagaccacggtggtgccaccg
gcgctggctgcagtgtcggcgggccgcgtcgtcgtcacgcaaccgcgccggatggccgcc
cgagctgccgcgcgtcgtctcgtctcactcagcggtgcgcagttgggccgcgaggtcggc
tacacggtgcgcggggaccgacacgtttcggctgccacgcgggtggagttcgtgacgacc
ggggtgctgctgcgtcggctgatcgcggacccggaagccagcggaatcggcgccatcgtg
ctcgacgaggtccacgagcgtcaccttgacaccgatctgaccttcgccttggtggaacag
ctgggtcagctgcgcccggacctgcatgtggtggtgatgtcggcaaccctcgacgtcgga
cactgggcggagttgctgggtgcacgggtgcttgaggtggccaccgaaccgcatccgctg
caggagatctgggcaccctggggaacgcaggcgcagcgcagtctggatgcccgcggggtc
gcacccggttttctggatcatgtggccgacgtcgtcgtcgagtatcagcatctgcaccag
ttcccgcgtacccccgttggtcccgatcgccccggtgacaccctggtgtttttgcccggc
gcccgtgagatcgaccgggtggcggcccggctgggtagcgacccgcgcctggcgcccgat
accgcggtgctgcctctgctggggtcgatgccggcccgggaacaggaccggattctggcc
cgcagtaccgacactgcctcacagtttccccggcgcatcgtgttggccaccaatgtggcg
gaatcggcgctgaccgtgcccggggtgcggctggtggtggacgccggtctggatcgggcc
ctgcgggaggattcccggcgcggggtatccgggctgatcaccctcggcgcgtccaaatcc
gccatggtgcagcgcggtgggcgtgcggcccgcgaggcgcccggcacggtggtgcgctgt
ctgagcgaggccgaatacgcggcacggccggcccacactgcgcccgaaatccgcaccgca
ggacgcaacgagctcggccgggcactactcgacgtcgcctgttggggagccccgcgcggt
gctggcctgcggctgccggacccgtttccgacggcggccgccgatcgagccgagcagcgc
ctgcaggaactgggcgcggtccacgacgacggcaccccgacggagctgggtgcgcggatg
tcccgactgccggtggacccccatctgggccgggccctgctcgacggggcagagctgtgg
gacgcccgggtggcggccgaggcagtggccaccctggccgcggacacgcgtgcaccgggg
gccgatctgatggcgcgctaccggcagctgcgctcggatccgggctggcgtcatgacgtc
gatcggctggcccgggccgcggtggtggcggaggaccgcgccccgcagtcgcagggacac
gacgacgccagagggcctctcgaccagcatcaccttcaccacgacgcactcggtctgatc
accgcgctggcctacccgcagcagatcgcccgacgccgggacgccgaatacctgctcgcg
tccggcaccgcggcccggttgccggcgtcgtcgtcgctgatcggggccgaatggattgcg
gtggccgagctgagcctgcacggcgaccatgcggtgattcgcgccgccgtcgagctggat
cccgagcacgctgagttagcagcgggccctctgctcgtggacgagacagtggcccgcttc
gacgccgcctccgatactcaccgccgggtcaccgcccgccgaatccgccgtctgggcgcc
atcgaactcagttccaccccggtgccgccacagcccgaacacgcccgatccgccgtcgtc
gccgaatggcgcgagaccggggtgctcgccctgatgcagcgcgccggagcatcggtgacg
accctgcggaatcggctgggcttcctgcatcgcgtgtacggcgccccctggcccgaggtg
accgacgccgcactcaccgccaccgtggaggactggctcggcccggaaatcgaccagctc
gccgccggtgccgccgaacgctcactggacctccattccgcgctgcgccggctgctcccc
tggcccgaggccgcccggttcgacgagctcgccccgctccggctgacggtgccctcgggc
tcgcagatcaccctggactggccggcccccgaagaccacccctctcagaacaatcccgac
gccgacacgccggccccaccggttctcgcggtgaaactgcaggagtgcttcggctggcgc
accgggcccaccgtggccgagggccgggttcccgtgctgttgcacctgctctcccctgcc
ggacgacccctggcggtcacctcggatctgaactcattttgggagaatgcctatccggcc
gtgcgagcggaaaaccgtgcccgctacgccaaacatccctggccggaagacccgtggacc
gccgtcgccacctcgcgcacgaacagtgcgatgcggagaatacctcctagttga
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