Campylobacter mucosalis: CMCT_0722
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Entry
CMCT_0722 CDS
T06923
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cmuc
Campylobacter mucosalis
Pathway
cmuc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cmuc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CMCT_0722 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmuc03021
]
CMCT_0722 (rpoD)
Transcription machinery [BR:
cmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CMCT_0722 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
MMR_HSR1_Xtn
MCR_beta_N
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QKF62865
LinkDB
All DBs
Position
complement(693799..695652)
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AA seq
617 aa
AA seq
DB search
MSTSKEIFTQIEELFAENSKGFVTYEKLIKLFDKAPTATAVKKIETLAKTHKVQLISAAQ
IAKMRNLADAKKRQKEAEKSQDVDIDDEFDLTGDTDFLEWSRSDSPVRMYLREMGQIALL
TKDEEIEISKKIELGEDIIIDAFCSVPFLIDFILDYKEPLINRERRVKELFKSFEDENEE
EEDDIDSDEDEENEDEADAKPKKNLKNDKRAEKVIESFKALEKAKKEWLKTANKQTDIDE
TDILANLTLAFKKKILKDKLMDLGPTSKLISEIVKSMETALKSDDEFDRELKRLEYRLPM
FSDELKKNHKGILKDILKLNKEDIIARVPEATMVSTYVEIKKLFQTKEASKSGFNLEPAK
LKEVLEQIKRGKKISDEAKARMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAVD
KFEYRKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKINRKYMQEEGKE
PDVSVIAAEVGLSIDKVKQVIKITKEPISLEAPIANEDDGKFGDFVEDKSSLSPMDHILK
NDLREQIDDVLSQLNEREKAVICMRFGLLEDESDRTLEEIGKALNVTRERVRQIESSAIK
KLKHPKVGRKLKNYIEG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatctaaagaaatttttacccaaatagaagagctatttgctgaaaattcaaag
ggctttgtaacgtatgaaaaacttataaaactatttgacaaagcacctacagcaacggca
gtaaaaaagatagaaactcttgcaaaaacacataaagttcaactaataagtgccgcacaa
atagcaaaaatgcgtaacttagcagacgccaaaaaacgccaaaaagaggcagaaaaatct
caagatgtggatatagacgatgagtttgacctaactggcgatacagactttttagagtgg
tcacgctcagatagtcctgtgcgtatgtatctgcgtgaaatgggacagattgcacttctt
acaaaagatgaagagattgaaatttcaaagaagatcgagcttggcgaagacatcataata
gacgcattttgttcggtgccatttttgatcgacttcatacttgattataaagaaccgctt
ataaatcgcgaacgccgtgtaaaagagctatttaagagctttgaagatgaaaatgaggaa
gaagaggacgatatcgactcagatgaagatgaagaaaacgaggacgaagcagacgccaag
ccaaagaaaaatttaaaaaacgacaaacgtgcagaaaaggtaattgaaagctttaaagca
ctagaaaaagcaaaaaaagagtggttaaaaacagcaaataaacaaaccgacatagatgag
actgatatcttagccaacctaactcttgcctttaaaaagaaaattttaaaagacaaatta
atggatttaggtccaacaagcaagctaattagcgagattgtaaagtcaatggagacggcc
ctaaagagtgatgatgagtttgatagagagcttaaaagacttgagtatcgtttgcctatg
tttagtgacgagcttaagaaaaaccacaagggaattttaaaggatattttaaagctaaat
aaagaggatatcatcgctcgtgtgcctgaagctacaatggtttcaacctatgttgagatt
aaaaaactatttcaaacaaaagaggcaagcaagagcggttttaacctagaaccagcaaaa
cttaaggaagttttagagcaaatcaaacgcggtaagaaaatttctgatgaagcaaaagca
agaatggcaaaatcaaatctccgcctagtcgtaagcatagcaaaacgctacacaaaccgc
ggtttgccgtttttagatctaatacaagagggtaatatcggacttatgaaagcggttgat
aaatttgaataccgtaagggttataaattctcaacttacgcgacgtggtggatacgtcaa
gccatttcacgtgcgattgctgatcaggctagaacgattagaattccaatccatatgatt
gaaaccataaaccgcataaataaaatcaaccgcaaatatatgcaagaagagggtaaagag
cctgacgtaagcgttattgccgctgaggttggactaagcatagataaggtaaaacaagtc
ataaaaatcacaaaagaacctataagccttgaagcacctatcgcaaacgaggatgacgga
aaatttggcgattttgtagaggataaaagctcactaagtccaatggatcacattcttaaa
aacgaccttagagagcagatagacgatgttttaagccaactaaacgaacgcgaaaaggcg
gttatttgtatgcgttttggacttcttgaagatgagagcgaccgcacacttgaggagatc
ggcaaggctttaaatgtaacaagagagcgtgtgcgtcagatagaaagctcagcaattaaa
aagttaaaacacccaaaagtaggcagaaagcttaaaaactacattgagggctaa
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