Chlamydia muridarum Nigg CM972: Y015_00040
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Entry
Y015_00040 CDS
T03671
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cmur
Chlamydia muridarum Nigg CM972
Pathway
cmur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Y015_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmur03400
]
Y015_00040
Enzymes [BR:
cmur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Y015_00040
DNA repair and recombination proteins [BR:
cmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Y015_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
PDDEXK_1
ResIII
DEAD
DUF7660
Motif
Other DBs
NCBI-ProteinID:
AHH23332
LinkDB
All DBs
Position
complement(7797..10877)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSSFDIFSPTTSVSGKFFLEASAGTGKTFTIEQVILRSLLEGNVEQTKNILVVTFTNAAT
NELKLRIQESLKQALTLFSQALSHPETPLPPYVSSQETKVKQLYIKIRNSLATLDEMNIF
TIHGFCRFTLEQHFPWVQPIHPSSMFSEPQTIQQYILDYLRQNSWENVLSPKQYAFLSYH
HRATTQQTRHLADRLLQDYASTPNLALPPLSITLQKVKNWSSQYKHLSPLSLEELQDFSL
RFKQSDLPIDRELPDFVKQFETDPNSLDILFFPGMVQKFQEENRNKKKLGPPFSPLDPFL
KDWLLIAQPFCQKEPIFHTLLKSVQQHLKTYCAQSYSHDESIATLESLLAQNDHVVSQLR
KQFQLVLIDEFQDTDKRQWKIFSKLFASPDYSGSLFLIGDPKQSIYEWRNADLPTYLQAK
NSFPKESQLILDTNYRSTPQLMQALNHLFSLPSPFLETPQTILYHPLQSKGSASTSYSEF
RPIHFFTTQDSQEEALWISKTASYLRSTFAIPFGNMAVLVQDYPQALKLITHSTIPMAYC
KEKRIFDRTESPYLLILLLEALLYPENQQKIQAILLSRFFHLSATDIHQHLKIFSSLFFM
LNTYLHQYSLLATFYKLMGETVFSQTIGETLLQTPLGDIIFQELEELCLYLDKTTENPHH
KLFHLINILDTGKYDEELSFSSQSNDDNVLKITTVHSSKGLEYDVVFCSSLNKVKEKSPS
VHMREMYVACTRAKKFLFIPFSSIEKRLQSNKKVSALANYANITQHDNIPHLVETLTASH
PEFFSSGTQPPESNISIFSEPLPEQEFFSLPILSSQPIYSFSSTTESQYFTEPFQEISSS
SLFPGGSLTGTLIHKLLESLSGNFNASLEEITHKAQTLLKNTILEGFESIISEKIYTAFS
TKLPFVSGSFALKDVHPYNIRVEETFLLQENGELWQGIVDLFFEHNNRFFIIDWKTSFLG
DEPSLYSPDKLLLYIQRQGLDKQGVLYKRAAKKFLHQFNSSLQIEMAFVFIRGIDDKGNG
FLQPSP
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttcgatattttttctccgacaacttctgtttccggaaaatttttcctagaa
gcatccgcaggaacgggaaaaacatttaccatagaacaagttatcctccgttctctatta
gaaggaaacgttgaacaaactaagaatattctcgtagttacatttacgaacgcagctaca
aatgaattaaaattacgtattcaagaaagccttaaacaagctttaacgctcttctctcaa
gctctttctcatcccgaaacacctttacccccctatgtttcttctcaagaaaccaaagta
aagcagctttacattaaaattcgtaatagcctagccactttagatgaaatgaatattttc
actattcatggattttgccgttttacattagaacaacacttcccttgggtgcaacccatt
cacccttcttccatgttctcagagccccaaaccattcagcaatatattctggattactta
agacaaaatagctgggaaaacgttctttctcctaaacaatacgccttcttatcctatcat
catcgagccactacccaacaaactcgtcatttagcagacagactgcttcaagactatgct
tctacacccaaccttgctctcccccctctatctataactcttcaaaaagtgaagaactgg
tcttctcaatataaacacctttcccctctttctcttgaagagttacaagatttttcgctc
cgatttaaacaaagcgatctaccaatcgatcgggaattacccgattttgtgaaacaattc
gaaacagaccccaattctttagacatcctatttttcccgggaatggttcagaaatttcag
gaagaaaatcgaaataaaaagaaattgggaccccctttttcccctttagatccttttctc
aaagactggttactaatagcccagcccttctgtcaaaaagaacctattttccatacactg
cttaaaagcgtacaacaacacttaaaaacgtattgtgcacaatcctactcgcatgatgaa
agcatagccactttagagtctttgctagcacagaatgaccacgttgtttctcagctacga
aaacaatttcaattagttttgattgatgaatttcaagatacagacaaacgtcagtggaaa
attttttctaaactctttgcttctcctgattattcaggatcactatttcttattggagat
cctaaacagtctatttatgaatggagaaacgcagaccttccaacctacctccaagcaaaa
aactcctttcctaaggagtctcagctaatattggatacgaattaccgatccactccacaa
ctcatgcaagctctaaaccatcttttttcgctcccctctccttttttagaaaccccacaa
actattctttaccacccactccaatctaaaggaagcgcctccacttcgtattcagagttt
cgtcctatccatttctttactacacaagattcccaagaagaagctctctggatttcaaaa
accgcttcttatctacgttctacattcgctattccctttgggaatatggcagtcttagtc
caagactatccgcaagcactcaaattgatcactcatagcacgattcctatggcgtattgc
aaagaaaaacgcatttttgatcgcacagaatcgccctatctcctcattcttcttttagaa
gctcttctatacccagaaaatcaacaaaagattcaggccattttactgagtcgttttttt
catctttctgctacagatattcatcagcatttaaaaattttctcctctctgttttttatg
ctgaatacgtatctccaccaatactctttactagctacgttttataaattgatgggagaa
accgttttctcccaaaccataggagaaacgttattacaaacaccccttggtgacattatt
ttccaagaattagaagagctttgtttgtatcttgataaaactacggaaaatcctcatcac
aagctatttcatcttataaacattctagatactggaaaatatgatgaagagctttccttt
tcctctcagtctaatgacgataatgtgcttaaaattaccacagtccactcttcaaaaggc
ttagaatacgatgtcgttttttgttctagtcttaacaaagttaaagagaaatctccttct
gttcacatgagagaaatgtatgttgcttgtactcgtgctaagaaattcttattcatccct
ttctcctctatagagaaacgtttacaaagcaataaaaaagtttctgctcttgctaactat
gccaatattacacaacacgataacatccctcatttagtagaaactctgaccgcatcccat
ccagaatttttctcttcaggtacgcaacctccggaaagcaatatctctattttctcagaa
cctctccccgaacaagagtttttttctcttccaatactatcttcccaacccatctattct
ttttcttccacaacagaatcacagtattttactgagccttttcaagagatttcttcctct
tctttatttcctgggggatctctaacaggaactcttattcacaagcttttagagtcgtta
tcagggaattttaacgcctctcttgaggagattactcataaagcccaaactttattgaaa
aacacaattttggaaggcttcgagtctattatttcagagaaaatctacacagctttctca
acaaaactcccttttgtttcaggaagctttgctcttaaggacgttcatccttacaatatt
cgtgtggaagagacttttctccttcaagagaatggggagttgtggcaaggaattgtcgat
cttttttttgaacacaacaatagatttttcattatcgactggaaaacatcttttctaggg
gatgaaccctctctttactctccagataaactccttctttatatccagcgccaaggattg
gataaacaaggggtgttatataaaagagcggctaaaaagttcctgcatcaattcaattct
tctcttcaaattgagatggctttcgtattcattcgaggaattgatgacaaaggaaatgga
ttcttacaacctagcccttaa
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