Chlamydia muridarum Nigg CM972: Y015_03090
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Entry
Y015_03090 CDS
T03671
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cmur
Chlamydia muridarum Nigg CM972
Pathway
cmur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Y015_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmur03021
]
Y015_03090
03400 DNA repair and recombination proteins [BR:
cmur03400
]
Y015_03090
Enzymes [BR:
cmur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Y015_03090
Transcription machinery [BR:
cmur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Y015_03090
DNA repair and recombination proteins [BR:
cmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Y015_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AHH23901
LinkDB
All DBs
Position
complement(700863..705053)
Genome browser
AA seq
1396 aa
AA seq
DB search
MFKEGSRDDAALAKEGLFDKLEIGIASDVTIRDKWSCGEIKKPETINYRTFKPEKGGLFC
EKIFGPTKDWECYCGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPIVHIWFFK
TTPSRIGNVLGMTASDLERVIYYEEYVVIDPGNTDLVKKQLLNDAKYREVVEKWGKDAFV
AKMGGEAVYDLLKSEDLESLLGELKDRLRKTKSQQARMKLAKRLKIVEGFVSSSNRPEWM
VLKNIPVVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR
MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRVDYSGRSVIIV
GPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSAKKMIQRGAPEVWDVLEEIIK
GHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRVHPLVCAAFNADFDGDQMAVHVPLSIEAQ
LEAKVLMMAPDNIFLPSSGKPVATPSKDMTLGIYYLMADPTYFPEEHGGKTKVFKDEVEV
LRALNAGGFILKDEICGSRRDETGRGIHIHEAIKVRIDGQIIETTPGRVFFNTIVPKELG
FQNYSMPSKRISELILQCYKKVGLEATVRFLDDLKELGFVQSTKAAISMGLKDVRIPEIK
KEILKDAYDKVAVVKKQYEDGIITDGERHSKTISIWTEVSDLLSNALYAEIKKQTNSKHN
PLFLMIDSGARGNKSQLKQLGALRGLMAKPNGAIIESPITSNFREGLTVLEYSISSHGAR
KGLADTALKTADSGYLTRRLVDVAQDVIITEKDCGTLNHIEVSTIRQGSEELLPLKDRIY
GRTVSENVYQPGDKSNVLAYAGDVLTSSQAEAIDDAGIDSVKIRSTLTCESRRGVCAKCY
GLNLANGRLIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIVAECDGILVY
LDLRFVVDQEGNNLVLNKMGALHLVRDEGRSLSEYKKLLSTKSIESLATFPVELGAKILV
DDGAAVTAGQRIAEVELHNIPIICDKPGFVHYEDLVEGVSTEKVTNKNTGLVELIVKQHR
GELHPQIAIYADANMQELVGTYAIPSGAIISVEEGQRIAPGMLLARLPRGAIKTKDITGG
LPRVAELVEARKPEDAADIAKIDGVVDFKGIQKNKRILVVRDEVTGMEEEHLISLTKHLI
VQRGDSVIKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDINDKHIEIIV
RQMLQKVRITDPGDTTLLFGEDVDKKEFYEENRRTEEDGGKPAQAVPVLLGITKASLGTE
SFISAASFQDTTRVLTDAACSSKTDYLLGFKENVIMGHMIPGGTGFDTHKRIKQHLEKEQ
EDLVFDFDSEFESVAG
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagaaggttctcgagacgatgcagccctagcaaaagaagggttgtttgataag
ttagaaattgggattgcttcagatgtgactattcgcgacaagtggtcttgtggcgaaatt
aagaaacctgagacgatcaattatcgcacattcaagcctgaaaaaggcggattgttttgt
gagaagattttcggtcctactaaggactgggaatgttactgcggtaaatacaagaagatt
aagcacaaaggtattgtgtgtgatcgttgcggagtggaagtcacgctgtctaaggtgcga
cgagaaagaatggctcatattgaattagctgttcctattgttcacatttggtttttcaaa
actactccatctagaattggtaatgttttgggaatgacagcttcggatttggagcgtgta
atttactacgaagaatacgttgtcattgatccaggtaatactgatcttgtgaaaaaacaa
cttctgaatgatgcaaaatatcgagaagttgttgagaaatggggtaaagatgcttttgtc
gccaaaatggggggagaagctgtttatgatcttcttaaatccgaggatttagaaagcctc
cttggtgagcttaaagatcgtttgagaaaaacaaaatcccagcaagcaagaatgaagctt
gctaagcggttgaagattgtagaagggtttgtatcttcctctaaccgtccagaatggatg
gtcttgaagaacatccctgttgttccaccagatcttcgtcctttagttccattggatgga
gggcgttttgctacttcagatctgaacgatttatatcgtagggttattaatcgaaataat
cgtttgaaagctatcttgcgcttgaagactcctgaggtaattgttcgcaatgagaaacgg
atgttacaggaagctgtggatgctctgtttgataatggacgtcatggacatcctgttatg
ggagcaggaaatagaccccttaagtctctatcagagatgttaaaagggaaaaatggtcgt
ttccgacaaaacttattaggtaaacgagtagactactctggccgttctgttattattgtt
ggtcccgagttgaagtttaatcaatgtggtttgcccaaagaaatggcgttagagttgttc
gagccattcattatcaagcgactaaaagatcagggtagtgtttatactatccgttcagca
aagaaaatgattcaacgaggcgcaccagaggtttgggacgttcttgaggaaatcattaaa
ggacacccagtcttattgaaccgagctcctactttgcaccgattgggaatacaggctttt
gagccagtgttgattgaagggaaagcgattcgggttcacccattagtgtgtgcagcgttt
aacgccgatttcgatggagaccaaatggcggttcacgtgcctctttctattgaagctcag
ttagaggcgaaggtgttaatgatggctcctgataacattttcttgccatcttctggaaaa
cctgttgccacaccttctaaggatatgacattgggcatctattatttgatggctgatcca
acgtattttcctgaagaacacggagggaaaactaaagtatttaaagatgaagtagaagta
cttcgtgctttgaatgctggaggttttatccttaaggatgagatatgtggttctcgtcgg
gatgaaactggacgagggattcatattcatgaagccattaaagttcgaattgatggtcaa
attattgagaccactcctggccgcgtatttttcaacacaatcgttcctaaagaacttggc
ttccaaaactatagtatgccaagtaaacgtatcagtgagctaatcttgcaatgctataag
aaagttggtttagaagctactgtacgctttttggatgatttgaaagagctaggtttcgtg
caatctacgaaagctgcaatttctatgggattgaaggatgttcgaattcctgaaattaag
aaagagattttgaaagacgcttacgataaggttgctgtcgttaagaaacaatatgaagac
ggtattattaccgatggggagcggcattccaagacaattagtatctggactgaagtttcc
gatcttttatctaatgcgttgtatgctgagatcaaaaagcaaaccaatagcaaacataat
ccgctgttcttaatgattgattctggagctagaggaaacaaatctcagttgaaacagctt
ggagctttgcggggattgatggctaaacctaacggagccattattgaatctccaattact
tctaacttccgagaaggattgacagtgcttgagtactctatttcttctcacggagctaga
aaaggattagcagacacagcgcttaaaactgcggattccggatatttaacccgtcgtttg
gtggacgttgctcaggatgttatcattacagaaaaagattgtggtacattgaatcatatt
gaggtgtcgacaatccgtcaggggtctgaagaattactgcctttgaaagaccgtatttat
ggacgtacagtttctgaaaatgtctatcagccaggagataaaagtaacgttttagcctat
gctggggatgtattaacttcttcccaagctgaggctattgatgatgcaggtattgatagc
gtaaaaatccgatctacgcttacttgtgaaagccggcgaggagtttgtgccaagtgttat
ggtttgaaccttgctaatggccggctgattggattaggagaagctgttggtattattgct
gctcaatccattggggaacctggaactcagttaacaatgagaacgttccaccttgggggg
attgctgcgacatcctcaactccagaaatcgttgccgagtgtgatggaattcttgtttac
ttagacttacgctttgttgtagaccaagaaggtaataatcttgttctgaataagatggga
gctcttcacttggtccgtgacgaaggacgaagtttgagtgaatacaagaagcttttgagt
acgaagtccatcgaaagcttagcgacattcccagtagaattgggagctaagattttggtt
gatgacggtgcagctgtcacggccggacaaagaattgctgaagttgagctccacaatatc
ccaattatctgtgataagccaggattcgttcactatgaagatttagtggaaggagtttcc
acagagaaagtcacgaataagaacacgggtcttgtcgaattaattgtgaaacaacacagg
ggagaattgcatcctcagattgctatatatgctgacgccaatatgcaggaattggttggt
acatatgccattccttctggggctattatctctgttgaagaggggcaacgtattgctcca
ggaatgttgttagcgagattgcctcgaggagcaattaaaacgaaggatattactggtggt
ttgcctagggttgcagagttagtagaagctcgtaagcctgaagatgccgcggatattgct
aagattgatggggttgtagacttcaaaggtatccagaagaataagcgtattcttgttgtg
cgtgatgaagttacgggaatggaagaagagcatctgatttctttgaccaaacacttgatc
gtgcaacgtggagatagcgtaatcaaaggtcagcagttaacggacggtttagtcgttcct
catgaaattcttgaaatttgtggggttcgtgaattgcagaaatatttggttaatgaggtt
caagaagtataccgactgcaaggtgtggacattaatgacaaacacattgaaattattgtt
cgacagatgttgcagaaagtgcgtattactgatccaggtgatacaaccttgttgttcgga
gaggatgtcgataagaaagagttttatgaagaaaaccgccgtacggaagaggatggaggg
aaacctgctcaagctgttccagtgctgcttggaatcactaaagcttctttgggaacggag
tcctttatttccgcggcctcattccaggacacaactcgagttttaacagatgctgcttgc
agtagtaagacagattatctgctaggattcaaagagaatgtgattatggggcacatgatc
cctggtggtacaggatttgatacgcataaacgtattaagcagcacctcgaaaaagagcaa
gaagacttggtctttgacttcgatagtgagtttgagtctgtagcaggctaa
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integrated database retrieval system
