Chlamydia muridarum Nigg CM972: Y015_03850
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Entry
Y015_03850 CDS
T03671
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cmur
Chlamydia muridarum Nigg CM972
Pathway
cmur03410
Base excision repair
cmur03430
Mismatch repair
cmur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Y015_03850
03430 Mismatch repair
Y015_03850
03440 Homologous recombination
Y015_03850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmur03400
]
Y015_03850
DNA repair and recombination proteins [BR:
cmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Y015_03850
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Y015_03850
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Y015_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AHH24042
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Position
complement(870000..871748)
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AA seq
582 aa
AA seq
DB search
MEKDKLSALGQKWTYPKHNEEFLKKIIKELYLHPVIAQVLVSRGFQSVQEIRDFLYPQFP
SLHPASSFLDMEKAVARLLKSKENNEHVMIYGDGDVDGITGVTLLVEFLQMLGVKTSYCC
SGTLFKQHGEITSLISQMLQDGVSLLITVDCGITAGREVRSINKQGIDVIVTDHHTPTGK
LPHCIATLNPKLDKNSYPNKELTGVGVAFKLVCATYEELIKQDASWKDKIDLLHFLDLVS
LGTIADVGRLSGENRILVSYGIKEITKGKRLGLKKLCSLSGVDKSDISSTNLGIRITPKL
NSLGRLADSSQGVKLLLSQDPRTVGTIVSELAIVNQERQRIEAEVLRDVERILAANPKLT
AQSAIVLASPYWHSRVIPIISARLARTYNKPVAIIALQDGIGKGSLRTIGAFPLLGVLRK
CESFFLSYGGHDFAAGLMIKEEQIEGFRKKFIHLVNSSLRKDEATLTLPLDVCMDFSQIS
QDLISSMELLEPFGKGNPSPVFYTRAIQVRYPKLLSGNHVKLYLNSGERNLEGTAFGQGD
KISLLKANWNMPLDIAYTLRVMKRSVHGAVRLLIQDFRIQAP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagacaaattatctgcactcggacaaaaatggacgtatcctaagcataatgag
gagtttctgaagaagattataaaagaattgtatcttcatcctgtaattgctcaagttctt
gtatcgcgagggtttcaatctgtccaagagatccgagattttttgtatccgcaattccca
tcgttacatccagcctcttcgtttttggatatggaaaaagctgtcgctcgtctccttaaa
tctaaggaaaacaatgagcatgttatgatctatggcgatggggatgtagacggcataaca
ggtgtgactttactcgtagaatttttacaaatgctcggagtaaagacgagctattgttgt
tccggtactttgtttaaacaacacggagaaattacctctttgatttctcagatgctacaa
gatggcgtttctctcttaattactgtggattgtggaattactgcaggaagggaagttcgt
tccattaacaaacagggtatagatgttattgtcacagatcatcatacgcctacagggaaa
cttccccattgtattgccacgttgaatccgaaattagataaaaattcttatccaaataag
gagctgaccggggttggggtagcttttaagttagtatgtgcaacttatgaagaactgatt
aagcaggatgcttcttggaaagataaaatagatctgttgcattttttagatttagtgagt
ttaggaacaattgcagatgttggcagactttccggggagaatcgtattttagtttcctat
ggaattaaagaaatcacaaaaggaaagcgtttaggcttaaaaaagctttgttctttgtca
ggggttgataaatcggatatttcttcaacaaatttaggaattagaattacccctaaatta
aatagcttaggaagattagcagattctagtcagggcgttaagttattattatctcaagat
cctcgaactgtgggaacaatcgtttcggagcttgctattgtgaatcaggagcgtcagaga
atagaggctgaagtgctccgtgatgtagaaagaattttggcagcaaatcctaagctaact
gctcaatctgccattgtattggcatctccttattggcattctcgagtcatcccgattatt
tctgctcgtttggcacgtacctataacaaacccgtagcaattattgctcttcaagatggt
ataggaaaaggttctttacgtacgataggggcgttccctttattaggagtgcttcgtaaa
tgcgaatcgttttttctatcctatggaggacatgattttgcagcagggcttatgatcaaa
gaggagcagatagaagggttcaggaaaaaattcatccatttagtgaattcctccttaagg
aaagacgaggctacgttaaccttgcctttggatgtatgcatggatttctctcaaattagc
caagatctgatctcttctatggagcttctggagccttttggtaaggggaatccgtctcca
gttttttatacaagggccatacaagtacgttatccaaagctattatctgggaatcacgta
aaattatatttaaatagtggggaaagaaatttggagggcacggcttttggtcagggagat
aagattagtttgctcaaggctaattggaatatgcctctagatatcgcttatacactgcgt
gttatgaagcggtctgttcatggggcggttcgtcttcttattcaggactttcgtatacag
gctccttga
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