Corynebacterium mustelae: CMUST_09065
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Entry
CMUST_09065 CDS
T03941
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cmv
Corynebacterium mustelae
Brite
KEGG Orthology (KO) [BR:
cmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmv03016
]
CMUST_09065
Enzymes [BR:
cmv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CMUST_09065
Transfer RNA biogenesis [BR:
cmv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CMUST_09065
Prokaryotic type
tRNA splicing ligases
CMUST_09065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AKK06130
UniProt:
A0A0G3H062
LinkDB
All DBs
Position
complement(1951487..1952737)
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AA seq
416 aa
AA seq
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MDIKSHQNHLFSNKYGLPEALPGASVPVRLWSPLSEIDYSAQRQIRNVAALPNMHGIAIM
PDVHSGNSVTVGSVIAMRQAVSPAAVGVDIGCGMIAVKLSSTIADLPADLADIRMAWESV
VPVGFAKHKTKAEIFKTDGFFRRDLKKLYSRFNQLRVDVSSLEKTSVRQCGTLGGGNHFI
ELCADGDGALWLMLHSGSRGIGKALAEQHISRARRLEWNSDLPDHNLAVFLHRDETGHEF
QEWNDYMHDLYWAQDYAAFSREVMMASIIEQLRVFLPGFSCSEAINCHHNYVSEERFDDL
ELVITRKGAISARHGELGIIPGSMGTGAYIVRGLGNDAAYCSASHGAGRVMSRSEARQTF
SMDDLLEQTAGVECRKDRGVLDEIPGAYKNLDRVIDYQSDLVEVVAKLETLLCIKG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacattaagtcccatcaaaaccatcttttctctaataaatatgggttgccggaagcc
ttaccgggtgccagtgtaccagtgagattatggtcaccactatcagaaattgattattcc
gctcaaagacaaattcgtaatgttgctgcattgccgaacatgcatgggatagcaataatg
ccggatgttcattctggcaattccgtcacggttggaagtgtgattgcaatgcgacaagca
gtatccccggctgcggttggcgtagacattggttgcggaatgattgcagtgaaattgagt
tcaaccatagccgatctcccggctgatcttgcagatatcaggatggcatgggaatcggtt
gttcctgttgggtttgcaaaacataaaaccaaggctgaaatttttaaaactgacgggttc
tttcgtcgagatttaaaaaagttatattcccgcttcaatcaactgcgagttgatgtgtcg
tctttggaaaaaactagcgtgcgtcagtgtggcacccttggcggtggtaatcactttatc
gagttgtgtgctgatggcgatggggcactgtggctaatgctgcattcgggctctagaggt
attggaaaggcattagctgaacagcacataagccgggcacgcagactggaatggaatagt
gacttaccagaccacaatttggcagttttcctgcaccgagacgaaacaggccacgaattt
caagagtggaacgattatatgcatgacctttattgggcgcaggactacgctgcttttagc
cgtgaagtaatgatggcatcaattattgagcaactccgcgtttttcttccgggttttagc
tgcagtgaagccataaattgccatcataactatgtaagcgaagagcgtttcgacgacttg
gagctggtgataacaagaaaaggggcgattagcgcccggcacggcgaactgggaattatc
ccgggttccatgggaactggtgcctatattgtgcgcgggctgggaaacgacgcggcatac
tgttccgcctctcatggagcggggcgggtgatgagtaggtcggaggcaaggcagacgttc
agcatggatgatttgctggagcaaactgcaggtgttgagtgccgtaaagatcgtggggtt
ttggatgaaatcccaggtgcgtataaaaacctggatcgagttatcgactaccaaagcgac
ttggttgaggttgttgcgaaacttgaaacactcttgtgtatcaagggttaa
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