KEGG   Cronobacter muytjensii: AFK63_01920
Entry
AFK63_01920       CDS       T04067                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
cmw  Cronobacter muytjensii
Pathway
cmw02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cmw00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AFK63_01920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmw03021]
    AFK63_01920
Transcription machinery [BR:cmw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AFK63_01920
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DNA_ligase_A_N BLOC1_2 HTH_SUN2 TMPIT
Other DBs
NCBI-ProteinID: ALB69427
LinkDB
Position
complement(384071..385915)
AA seq 614 aa
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENSNSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDLAPTA
THVGSELSQEEMDDDEDEDEESDDDSSDDDNSIDPELAREKFGELRTQYEVTRDTIKAKG
RSNAASQEEILKLSDVFKQFRLVPKQFDYLVNSMRTMMDRVRTQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVAEDVHRSLQKLQQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggagcaaaacccgcagtcacagcttaagcttcttgtcacccgtggtaaggagcagggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgatcag
atcgaagacatcatccaaatgatcaacgatatgggcatccaggtgatggaagaagcgccg
gacgccgacgatctgttgcttgctgaaaactcgaacagcaccgatgaagatgcggaagaa
gccgcggcccaggtgttgtccagcgtggaatctgaaatcgggcgcaccaccgatccggtt
cgcatgtacatgcgcgaaatgggcaccgttgagctgttgacccgtgaaggcgaaatcgac
atcgccaaacgcatcgaagacgggatcaaccaggttcagtgctctgtcgccgaatatccg
gaagcgatcacctatctgctggagcagtacgatcgtgtggaagcgggcgaagcgcgtctt
tccgatctgatcaccggttttgtcgatccgaacgccgaagaagacctggcccctaccgcg
acgcacgtcggctctgaactctctcaggaagagatggatgatgacgaagatgaagacgaa
gagtctgacgacgacagcagcgatgacgacaacagcatcgacccggaactggcgcgcgag
aaattcggcgagctgcgtacccagtacgaagtcacccgcgacaccatcaaagccaaaggc
cgcagcaacgcggcgtctcaggaagagatcctgaagctttccgacgtgttcaaacagttc
cgtctggtgccgaaacagttcgactacctggtaaacagcatgcgtaccatgatggatcgt
gtgcgcacccaggaacgcatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaag
aagaactttatcactctctttaccggcaacgaaaccagcgaaacctggtttaacgcggca
atcgccatgaacaaaccgtggtctgagaagctccacgacgtggcggaagatgtacaccgc
agcctgcaaaaactgcagcagatcgaagaagaaaccggcctgaccatcgagcaggtgaag
gatatcaaccgtcgcatgtccatcggcgaagcgaaagcccgtcgtgcgaagaaagagatg
gttgaggcgaacttacgtctggtaatttctatcgccaagaaatacaccaaccgtggtctg
cagttcctcgacctgattcaggaaggcaacatcggcctgatgaaagcggtagataagttc
gaataccgccgtggctataagttctccacctatgctacctggtggatccgtcaggccatc
acccgctctatcgcggaccaggcgcgcaccattcgtattccggtgcatatgattgagacc
atcaacaagctcaatcgtatctcccgccagatgttgcaggagatgggccgtgagccgacg
ccggaagagctggccgagcgcatgctgatgccggaagacaaaattcgtaaggtgctgaaa
atcgccaaagagcctatctccatggaaacgccgatcggcgacgatgaagattcgcatctg
ggggatttcatcgaggataccaccctcgaactgccgctggactccgcgaccaccgaaagc
ctgcgtgcggcgacgcatgacgtgctggcgggcctcaccgcgcgcgaagccaaagtgctg
cgtatgcgtttcggtatcgacatgaacaccgaccatacgctggaagaagtaggtaaacag
tttgacgttacccgcgaacgtatccgtcagatcgaagcgaaagcgctgcgtaagctgcgc
cacccgagccgttctgaagtgctgcgcagcttcctcgacgattaa

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