Cronobacter muytjensii: AFK63_01920
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Entry
AFK63_01920 CDS
T04067
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
cmw
Cronobacter muytjensii
Pathway
cmw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AFK63_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmw03021
]
AFK63_01920
Transcription machinery [BR:
cmw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFK63_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
BLOC1_2
HTH_SUN2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
ALB69427
LinkDB
All DBs
Position
complement(384071..385915)
Genome browser
AA seq
614 aa
AA seq
DB search
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENSNSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDLAPTA
THVGSELSQEEMDDDEDEDEESDDDSSDDDNSIDPELAREKFGELRTQYEVTRDTIKAKG
RSNAASQEEILKLSDVFKQFRLVPKQFDYLVNSMRTMMDRVRTQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVAEDVHRSLQKLQQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagcttaagcttcttgtcacccgtggtaaggagcagggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgatcag
atcgaagacatcatccaaatgatcaacgatatgggcatccaggtgatggaagaagcgccg
gacgccgacgatctgttgcttgctgaaaactcgaacagcaccgatgaagatgcggaagaa
gccgcggcccaggtgttgtccagcgtggaatctgaaatcgggcgcaccaccgatccggtt
cgcatgtacatgcgcgaaatgggcaccgttgagctgttgacccgtgaaggcgaaatcgac
atcgccaaacgcatcgaagacgggatcaaccaggttcagtgctctgtcgccgaatatccg
gaagcgatcacctatctgctggagcagtacgatcgtgtggaagcgggcgaagcgcgtctt
tccgatctgatcaccggttttgtcgatccgaacgccgaagaagacctggcccctaccgcg
acgcacgtcggctctgaactctctcaggaagagatggatgatgacgaagatgaagacgaa
gagtctgacgacgacagcagcgatgacgacaacagcatcgacccggaactggcgcgcgag
aaattcggcgagctgcgtacccagtacgaagtcacccgcgacaccatcaaagccaaaggc
cgcagcaacgcggcgtctcaggaagagatcctgaagctttccgacgtgttcaaacagttc
cgtctggtgccgaaacagttcgactacctggtaaacagcatgcgtaccatgatggatcgt
gtgcgcacccaggaacgcatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaag
aagaactttatcactctctttaccggcaacgaaaccagcgaaacctggtttaacgcggca
atcgccatgaacaaaccgtggtctgagaagctccacgacgtggcggaagatgtacaccgc
agcctgcaaaaactgcagcagatcgaagaagaaaccggcctgaccatcgagcaggtgaag
gatatcaaccgtcgcatgtccatcggcgaagcgaaagcccgtcgtgcgaagaaagagatg
gttgaggcgaacttacgtctggtaatttctatcgccaagaaatacaccaaccgtggtctg
cagttcctcgacctgattcaggaaggcaacatcggcctgatgaaagcggtagataagttc
gaataccgccgtggctataagttctccacctatgctacctggtggatccgtcaggccatc
acccgctctatcgcggaccaggcgcgcaccattcgtattccggtgcatatgattgagacc
atcaacaagctcaatcgtatctcccgccagatgttgcaggagatgggccgtgagccgacg
ccggaagagctggccgagcgcatgctgatgccggaagacaaaattcgtaaggtgctgaaa
atcgccaaagagcctatctccatggaaacgccgatcggcgacgatgaagattcgcatctg
ggggatttcatcgaggataccaccctcgaactgccgctggactccgcgaccaccgaaagc
ctgcgtgcggcgacgcatgacgtgctggcgggcctcaccgcgcgcgaagccaaagtgctg
cgtatgcgtttcggtatcgacatgaacaccgaccatacgctggaagaagtaggtaaacag
tttgacgttacccgcgaacgtatccgtcagatcgaagcgaaagcgctgcgtaagctgcgc
cacccgagccgttctgaagtgctgcgcagcttcctcgacgattaa
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