Cronobacter muytjensii: AFK63_02370
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Entry
AFK63_02370 CDS
T04067
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cmw
Cronobacter muytjensii
Pathway
cmw03410
Base excision repair
cmw03430
Mismatch repair
cmw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK63_02370
03430 Mismatch repair
AFK63_02370
03440 Homologous recombination
AFK63_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmw03400
]
AFK63_02370
DNA repair and recombination proteins [BR:
cmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AFK63_02370
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AFK63_02370
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AFK63_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALB69516
LinkDB
All DBs
Position
481556..483289
Genome browser
AA seq
577 aa
AA seq
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MSKQTQLRRRSPDEAISLPENLPPLLRRLYASRGVRSAQELERSVKGMLPWQQLCGIEQA
VAMLHNALREGLRIIVVGDFDADGATSTALSVLALRALGGSNVAYLVPNRFDDGYGLSPE
VVDQAHARGAQMILTVDNGISSHAGVARAHELGIPVLVTDHHLPGDTLPAAGAIINPNLA
ECTFPSKSLAGVGVAFYLMLALRAHLRSVGWFTEKGISEPNLAEFLDLVSLGTVADVVPL
DANNRILIWQGLSRIRAGKCRPGIRALLEIANREAHRLTASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARMLANELDALNQTRKEIEQGMQAEALTLCQQLERSGEALPSGIAI
FHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGLLKGSGRSVQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEARFPEFQQRFAELVNEWLDPAMLQGEIWSDGALAPQEMTLE
VAEMLRDAGPWGQMFPEPLFDGRFRILQQRLVGERHLKLMLEPVGGGPLLDGIAFNVDTT
CWPDPGVREVELAYKLDVNEFRGNRSLQLIIDHLWPV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacagacgcaacttcgcaggcgttcgccggatgaagccatttccttgcccgaa
aatttaccgccgctgctgcgcaggctctatgccagccgcggagtacgcagcgcgcaggaa
ctggagcgcagcgtaaaaggcatgctgccctggcagcaattgtgcggtattgaacaggcg
gtcgcgatgctgcacaacgcgctgcgtgaagggctgcgcattatcgttgtgggcgatttc
gatgccgacggcgccaccagtacggcgttaagcgtgctggcgctgcgcgcgctcggcggc
agcaatgtggcgtatctggtgcctaaccggttcgatgatggctacggtcttagcccggag
gttgtcgatcaggcccacgcgcgcggcgcgcagatgatcctcaccgtcgataacggcatc
tcatcgcatgcgggcgttgcgcgcgcgcatgagctgggcattccggtgctggtcaccgat
caccacttaccgggcgatacgctcccggcggcgggcgctattatcaacccgaacctcgcg
gagtgtacctttccgtcgaaatcgcttgcgggcgtcggcgtcgcgttttatctgatgctg
gccctgcgcgcgcatctgcgaagcgtcggctggtttacggaaaaaggcatttccgagcca
aatcttgcggagttcctcgacctggtgtcgcttggcaccgtagcggacgtggtgccgctt
gatgccaataaccgtatccttatctggcaagggctgagccgcatccgcgccggaaaatgt
cgcccggggatccgcgcgctgctggagatagccaaccgcgaggcgcaccgcctgacggca
agcgatctcggctttgcgcttggcccgcgtctcaacgcggcagggcggctggatgatatg
tccgtcggcgtggcgctcctgctgtgcgataacattggcgaagcccggatgctggcgaac
gaactcgacgcgctgaaccagacccgtaaagagattgagcaggggatgcaggcggaggcg
ctgacgctgtgtcagcaactggagcgcagcggcgaagcgttgccgagcgggatcgcgatt
ttccatcccgaatggcatcagggcgtggtcggtattctcgcctcgcgcatcaaagagcgt
ttccatcgtccggttatcgcctttgcgccagcaggcgacgggctactgaaaggttcaggc
cgctccgttcaggggctgcatatgcgcgacgcgcttgagcgtctcgacacgctctacccc
ggcatgatgctaaaatttggcggacatgcgatggcggcggggttgtcgcttgaagaggct
cgcttcccggagtttcaacagcgtttcgctgagctggttaacgagtggctagacccggcg
atgctgcagggcgaaatctggtccgatggcgcgctcgccccgcaggagatgacgctggaa
gtggcggaaatgctgcgcgacgcagggccgtggggacagatgttcccggagccgctgttt
gacggacgttttcgtattcttcagcagcgtctggtgggcgaacgccacctgaaactgatg
ctggagccggtcggcggcgggccgctgctggatggcatcgcgtttaacgtcgacaccacc
tgctggcccgatccaggcgtgcgcgaagtggaactcgcctataagcttgacgttaacgag
tttcgcggcaatcgcagcctgcaactcattatcgaccatctctggcctgtttag
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