Cronobacter muytjensii: AFK63_05585
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Entry
AFK63_05585 CDS
T04067
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cmw
Cronobacter muytjensii
Pathway
cmw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AFK63_05585 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmw03400
]
AFK63_05585 (sbcB)
Enzymes [BR:
cmw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AFK63_05585 (sbcB)
DNA repair and recombination proteins [BR:
cmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AFK63_05585 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK63_05585 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AFK63_05585 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALB70109
LinkDB
All DBs
Position
complement(1217449..1218924)
Genome browser
AA seq
491 aa
AA seq
DB search
MVYHSPVFLLTLDGDLVSDSAAQPTFLFHDYETFGKSPSLDRPAQFAALRTDENFNVLGE
PDVFYCKPADDYLPQPEAVLITGITPQVARARGENEAEFARRIHALFTVPKTCVVGYNNV
RFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFR
LEHLTVANGIEHANAHDAMADVHATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDIVQ
IKPLVHVSGMFGAWRGNTSWIAPLAWHPDNRNAVIVVDLAGNISPLLELDADALRERLYT
PKAALGDDSAVPVKLVHLNKCPVLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVRE
KLVALFAEAPPFPPTSNVDAQLYDGFFSDADRAAMRIVLQTPPQNLPALDITFVDKRIEK
LLFNYRARNFPGTLSEPEQQRWLNHRRDVFSPEFLQAYAQELEMLYNQYESDKEKTALLK
ALYQYAQEIVG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggtttaccatagccctgtttttttacttactctggatggtgacctggtgtctgattct
gccgcgcaaccgacttttctgttccacgactacgagaccttcggcaaaagcccctcgctc
gaccgcccggcgcagttcgccgctctgcgcaccgatgagaattttaacgttctcggcgag
ccggacgtcttctattgcaaacctgccgacgattaccttccacagccggaagccgtgctg
ataactggcattacgccgcaggtcgcccgcgcgcgcggcgagaacgaagccgagttcgca
agacgcatccatgcgctgttcaccgtgccgaaaacctgcgtggtgggctataacaacgtg
cgcttcgacgacgaagtgacacgcaatattttctaccgcaacttttacgacccttacgcg
tggagctggcagcacgacaactcgcgctgggatctgctggatgtgatgcgcgcctgctat
gcgctgcgcccggaagggattgtctggccagagaacagtgacggcctgccgagtttccgg
ctcgaacacctgacggtcgctaacggtatcgagcacgccaacgcgcacgacgcgatggcg
gatgtccacgccaccatcgcgatggcgcagctggtgaaaacccgtcagccgcggatgttc
gattatctctacacctatcgcagcaagcagaagctggcgacgctgattgatatcgtccag
ataaagccgctggtacatgtctccggcatgtttggcgcctggcgcggcaatacgagctgg
atagcgccgctcgcgtggcacccggacaaccgcaatgcggtgattgtggtggatctggca
gggaatatcagcccgctgctggagctggacgccgatgccctgcgcgaacggctgtatacg
ccgaaagccgcgctcggcgacgacagcgcggtgccggtgaagctggtgcatctcaataag
tgtccggtgctggcgcaggccaatacgctgcgcccggaagacgccgagcgcctggggatc
gaccgtcagcattgcctgaataatctgaaggtgctgcgcgattcgccgcaggtgcgtgag
aaactggtggcgctgtttgccgaggcgccccccttcccgcccaccagcaatgtggatgcg
cagctctacgacggctttttcagcgatgccgatcgcgccgcgatgcgcattgtgttgcag
acaccgccgcaaaacctcccggcgctggatatcacgttcgtggataagcgcatcgagaag
ttgttgtttaactaccgggcgcgcaattttcccggcacgctcagcgagccggaacagcaa
cgctggcttaaccaccgtcgtgatgtgttttcaccggaattcctgcaggcttacgcgcag
gagttagagatgctctacaaccagtatgaaagcgataaagaaaaaacggcgctgctaaaa
gcgctgtatcagtacgcgcaggagattgtcgggtaa
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