Cronobacter muytjensii: AFK63_12310
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Entry
AFK63_12310 CDS
T04067
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cmw
Cronobacter muytjensii
Pathway
cmw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFK63_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmw03400
]
AFK63_12310
DNA repair and recombination proteins [BR:
cmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK63_12310
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AFK63_12310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
Kinesin
IF2_N
DUF8810
Microtub_bd
DUF87
AAA_22
DUF4686
Motif
Other DBs
NCBI-ProteinID:
ALB71360
LinkDB
All DBs
Position
complement(2657484..2659505)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRIKEGLEDGLAHQTLLGVTGSGKTFTMANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDLALRVELFDEEVERLSLFDPLTGTVDSIIQR
FTVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTVYVSATPGNYELEKSGGEIIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMARAISETERRREKQQAYNEEHGIVPQGLNKKVVDILALG
ENIAKTKPKGRGKGRTVADVEAAELALTPKALQQKIHQLEAQMVQHAQNLEFEEAAQLRD
KLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccgttcaaactcaactccgctttcaaaccttccggcgaccagccagaggct
atccgccgcatcaaggaagggctggaggacgggctggcgcaccagacgctgcttggggtg
acgggctcgggtaagaccttcaccatggcgaacgttatcgccgatttgcagcgcccgacg
atggtactggcgcctaacaaaacgctggcggcgcaactttacggcgagatgaaagaattc
ttcccggagaatgctgtcgagtatttcgtctcctactacgactactaccagccggaagcc
tatgtgccgagctccgacacctttatcgaaaaggacgcgtcggtgaacgagcatattgag
cagatgcgtctgtcggcgaccaaagcgttgctggagcggcgcgatgtggttgtggtggcg
tcggtgtcggcgatttacggtctgggcgatccggatctctatctgaaaatgatgctgcat
ctcaccaaagggatgatcattgaccagcgcgcgattctgcgtcgactggcggagctgcaa
tatacccgcaacgatcaggcgtttcagcgcggcaccttccgcgtgcgcggcgaagtgatc
gatatcttcccggcggaatcggacgacctggcgctgcgcgtcgagctgtttgacgaagag
gtggagcggctgtcgctgttcgacccgctgaccggcaccgtggattccattatccagcgt
ttcaccgtctacccgaaaacgcactacgtcaccccgcgcgagcgcatcgtgcaggcgatg
gaagagatcaaagtggagctggcggagcgtcgtaaggtgctgcttgagaacaacaagttg
ctggaagagcagcgtctgacccagcgcacccagttcgatctcgaaatgatgaacgagctt
ggatattgctcgggcatcgaaaactattcgcgctatctctccgggcgtgggccgggcgag
gcgccgccaacgctgtttgactatctgccggcggacgggctgctggttatcgacgaatcg
cacgtgaccattccgcaaatcggcgggatgttccgcggcgaccgggcgcgcaaagagacg
ctggtggagtatggctttcgactgccgtcggcgctggataaccgtccgctgaagtttgaa
gaatttgaggcgctggcgccgcagaccgtctatgtgtcggcgacgcccggcaactatgag
ctcgaaaaatcgggcggcgagattatcgatcaggtggtgcgcccgaccgggctgctcgac
ccgattatcgaagtgcgtccggtggcgacgcaggtggacgatctgctgtcggaaatccgc
aaacgcgtcgctatcaacgaacgcgtgctggtgacgacgctcaccaagcgaatggccgaa
gatttaaccgaatatctggaagagcacggcgagaaggtgcgctacctgcactctgacatc
gataccgtggagcgtatggaaatcatccgcgacctgcggctgggtgaatttgacgtgctg
gtgggcattaacctgctgcgagaagggctggatatgccggaagtgtcgctggtggctatt
cttgacgccgacaaagagggcttcctgcgttccgagcgctcgcttattcagaccattggc
cgcgcggcgcgtaacgtcaacggtaaagcgattctctacggcgataaaattacgccgtcg
atggccagagcgattagcgaaaccgaacgccgtcgtgagaagcagcaggcatacaacgaa
gagcatggcattgtgccgcaggggctgaacaagaaggtggtggatattctggcgcttggc
gagaatatcgcgaaaaccaagccgaaaggccgcggcaaaggccggaccgtcgccgatgtc
gaagccgctgagctggcgctgacgccgaaagcgctgcagcagaaaattcatcagctggaa
gcgcagatggtgcagcacgcccagaacctggagtttgaagaggcggcgcagctgcgcgac
aagcttcaccagctacgcgagctgtttatcgctgcctcgtaa
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