Cronobacter muytjensii: AFK63_13780
Help
Entry
AFK63_13780 CDS
T04067
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cmw
Cronobacter muytjensii
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmw03400
]
AFK63_13780
DNA repair and recombination proteins [BR:
cmw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK63_13780
Archaeal homologous recombinant proteins
AFK63_13780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
cobW
AAA_15
AAA_21
ABC_ATPase
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ALB71632
LinkDB
All DBs
Position
2974895..2978044
Genome browser
AA seq
1049 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR
LNALSQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQSRARGQPDGNLQAPRVELARCD
DGKIVADKIKDKLDRIAALTGLDYDRFTRSMMLSQGQFAAFLNAEAKARAELLEELTGTE
IYGQVSARIFEQHKEARSQLEKLESQAQGVTLLDDAQRESLTRGLQALTDDEKTQLAQQR
QLQQQHLWLTQRTALAAALEAARQGVARAEQALQEAAPQLAKLEAALPAEKLRPAWLRCQ
ELETSLAATQRQHEEVSVRLQESAQRRREIRQAAAEQAQIRADDLARVARWLTEHDRYRL
WSSELAGWRAVLAQQKRDSQQIRALNDSLAATRRKRDALPDAGLFLTPEDVAQALSTLNE
QRPLRQQLATLQSAFAPLMRRKARQQEGFVALQTQIQQLEQQLAQKRQDYKTKQDEVARA
KAVCELEQRIASLVEERARLQPGSPCPLCGATEHPAVEAYQALKPDASRLRLTQLEQEKE
QLGAEGAALRGQLDALIRQRQQQENEATSLLEEEQALTSQWQTLCAAAAINAMPGEDITP
WLDEQTQREQQLQLLRERQTLEAAIDSAQRQLTALESAYQTQQETLRAQLAALSLAEPDH
DDPAPWFAAREEEATRWQQEHDRQQRLREQLTACENLLTLLPEDGDAQAAATPVDDLPRA
GHQAHTLCLSLEAQWQTLGAQLEQERARYQTACRAFDEALAASPFADKTAFFAALLDDAT
LRALEALKQRLAREREAQQTLFTQAQQALEHHLNARPATLDDTADARQSEAALALIAERL
RDNTTRQGELRQQLRQDEENRARLASLLGLIDEARREADEWGQLNHLVGSQKGDKFRKFA
QGLTLDNLVWLANNQLTRLHGRYLLKRKLSEDLELEVVDTWQADAVRDTRTLSGGESFLV
SLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDALNASGKTIGVISHVEA
MKERIPVQIKVRKINGLGVSRLAREYQVD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttaaccctgcggctgaaaaacctgaattcactcaaaggcgaatggaaaatc
gacttcaccgccgagccgttcgccagcaacggactgttcgccattaccggcccgaccggc
gcgggcaaaaccacgctgcttgacgccatctgccttgcgctctatcaccgcacgccgcgt
ctgaacgcgctgtcgcaaagccagaacgatttaatgacccgcgacaccgccgaatgtctg
gcggaggtggagtttgaagttaaaggcgtcgcctggcgcgcgttctggagccagagccgc
gcccgcggccagccggacggcaatttacaggcgccgcgcgtggagcttgcgcgctgtgac
gatggcaaaatcgtcgccgataaaatcaaagacaaacttgaccgcatcgccgcgctgacc
gggctggattatgaccgtttcacccgatcgatgatgctctcgcaggggcagttcgccgcg
tttctcaacgccgaggccaaagcccgcgccgaactgttagaagagctcaccggcactgaa
atctacggccaggtctccgcgcgtattttcgaacagcataaggaagcgcgcagccagctt
gagaagctcgaatcccaggcgcagggcgtgacgcttctggatgacgcgcagcgcgaaagc
cttaccagaggtttgcaggcgcttactgacgatgaaaaaacgcaactggcgcagcagcgt
cagctccagcaacagcatctgtggctgacgcagcgcaccgcgctcgccgccgcgcttgag
gcggcgcgtcagggcgtggcgcgggcggaacaggcattgcaggaggccgccccgcagctt
gcaaaactggaggcggcgctgcccgccgaaaaactgcgtccggcctggctgcgctgccag
gagcttgagacctcgcttgccgcgacccagcgccagcacgaagaagtgagcgttcgctta
caggaaagcgcccagcgccgccgggagatccgccaggcggcggcggaacaggcgcagatc
cgcgcagacgacctcgcccgggtcgcccgctggctcacggaacacgaccgctaccgcctc
tggagcagcgaactggcgggctggcgcgccgtgctggcgcagcaaaaacgcgacagccaa
cagatacgggcgcttaacgacagtctcgccgccacccggcgcaagcgcgacgcgctgccg
gacgccgggcttttcctcacccctgaagatgttgctcaggcgctctcgacgctcaacgaa
cagcgcccgctgcgccagcaactggcaacgctccagtcggcttttgcgccgctgatgcgc
cgtaaagcgcgccagcaggagggctttgtcgcgctgcaaacgcaaatccagcagctggag
cagcagcttgcgcaaaagcgtcaggattacaaaaccaaacaggacgaggtggcccgagca
aaagcggtctgcgagctggagcagcgcatcgcaagtctggtcgaagagcgcgcgcgcctg
cagcctggcagcccctgcccgctctgcggcgcgaccgaacacccggcggtggaggcgtat
caggcgctgaaacccgacgccagccgcctgcggctcacgcaactggagcaagaaaaagaa
cagcttggcgcggagggcgcggcgctgcgcggccagctcgacgcgctgataagacagcgc
cagcaacaggaaaacgaagcgacaagcctgctggaagaggagcaagcgctcacgtcgcag
tggcagacgctctgcgccgccgccgcgatcaacgcgatgccgggcgaggatatcacgccg
tggcttgacgagcagacacagcgcgagcagcagttgcaactgctgcgcgaacgccagacg
ctggaggcggccatcgacagcgcgcagcgccagctcaccgcgcttgaaagcgcgtatcag
acccagcaggagacactgcgcgcccagctggcggcattgtcgctggccgagccggaccac
gacgacccggcgccgtggttcgccgcgcgcgaagaagaggcgacacgctggcaacaggag
cacgatcgccagcaacgcctgcgcgagcagctcacggcctgcgaaaatctccttactctg
ctgccggaggatggcgacgcgcaggcggccgccacgccggtggacgacctgccgcgtgca
ggccatcaggctcatacgctctgcctgtcgctggaagcccagtggcagacgctcggcgcg
cagcttgagcaggagcgcgcgcgttatcaaaccgcttgccgcgcgtttgacgaggcgctc
gccgccagcccgttcgcggataaaacggcgttcttcgccgctttgctggatgacgcgacg
ctgcgcgcgcttgaggcgttaaaacagcggctggcgcgcgagcgggaggcgcagcagacg
ctgtttacgcaggcgcaacaggcgctggagcaccatcttaacgcgcgcccggccacgctt
gacgacacggcggatgcgcgtcagagcgaggcggcgctggcgcttatcgctgagcgatta
cgtgataatacgacgcgtcagggcgagctgcgccagcagctgcgccaggatgaagagaac
cgcgcgcggctcgcctccttgctcgggctgattgacgaggcgcggcgcgaggccgacgaa
tgggggcagctcaaccatctggtcggctcccagaaaggcgataagttccgtaaattcgcc
caggggctgacgctggataacctggtgtggcttgctaacaaccagttgacgcgtctgcat
ggccgctatctgctgaagcggaagctgagcgaagacctggagcttgaagtggtcgacacc
tggcaggcggacgcggtgcgcgatacccgtacgctctccggcggcgagagtttcctggta
agcctcgcgctggcgctggcgctttcggatctggtcagccataaaacccgcatcgattcg
ctgttcctcgatgagggcttcggcacgctggacgcgcagacgctcgacaccgcgctggat
gccctggacgcgctgaacgccagcggcaaaaccatcggcgtcatcagccacgttgaggcg
atgaaagagcgtattccggtgcagattaaagtcaggaagattaacggactcggcgtgagc
cggctggcgcgggagtatcaggtcgactga
DBGET
integrated database retrieval system