Cronobacter muytjensii: AFK63_16315
Help
Entry
AFK63_16315 CDS
T04067
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cmw
Cronobacter muytjensii
Pathway
cmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK63_16315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmw03019
]
AFK63_16315
03009 Ribosome biogenesis [BR:
cmw03009
]
AFK63_16315
Enzymes [BR:
cmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AFK63_16315
Messenger RNA biogenesis [BR:
cmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AFK63_16315
Ribosome biogenesis [BR:
cmw03009
]
Prokaryotic type
rRNA helicases
AFK63_16315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
Cas3-like_C_2
UTP25_NTPase-like
DRTGG
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ALB72108
LinkDB
All DBs
Position
complement(3549015..3550925)
Genome browser
AA seq
636 aa
AA seq
DB search
MAEFETTFTDLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNIDETLRAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLRMGFIEDVETIMAQIPAE
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLTKLQPEGELDVET
LAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRSDRNGEDRPRRE
RRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPT
EVLQHFTRTRILNKPMNMQLMGDAQPRGDRRPAGGGRGFGGERREGGERREGGRGEGRRF
SGERREGGRSFGGERREGGRGPRRDDATGRRRFSDA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttactgatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaatccaggcagaatgtattccgcatctg
ctgggtggtcgcgacgttctgggtatggcccagaccggtagcggcaaaaccgcggcgttc
tctctgccgctgcttaacaacattgacgaaactctgcgcgcgccgcagatcctcgtgctg
gcaccgacccgcgaactggcggttcaggttgccgaagcgatgacggatttttctaaacat
atgcatggcgtaaacgtcgtggccctgtatggcggccagcgttatgacgtgcagctgcgc
gcactgcgccagggcccgcagattgtggtcggtacgccgggccgtctgctggatcacctc
aagcgcggtacgctggatctttctaacctgaaaggtctggtactggacgaagccgatgaa
atgctgcgtatgggcttcatcgaagatgtcgaaactatcatggcgcagatcccggctgaa
catcagaccgcgctgttctccgcgaccatgccggaagcgattcgtcgcatcacccgccgc
tttatgaaagagccgcaggaagtgcgcatccagtccagcgttaccacgcgcccggacatc
agccagagctactggtctgtatacggtatgcgtaaaaacgaagcgctggtgcgtttcctc
gaagcggaagattttgatgcggcgatcattttcgtgcgcaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgcagcggttacaacagcgccgcgctgaacggtgacatgaac
caggcgctgcgtgagcagacgctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgttgcggcacgtggtctggacgttgagcgtatcagcctcgtggtgaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggccgtgcaggt
cgtgctggccgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gagcgcaccatgaagctcaccattccggaagttgagctgccgaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagtgatctg
gatcagtaccgcgcgctgctgaccaagcttcagccggaaggcgagctggatgtggaaacg
ctggctgccgcgctgctgaaaatggcgcagggcgaacgtccgctgatcctgccgccggat
gcgccgatgcgtccgaagcgcgaattccgcgatcgcgacgatcgtttcgagcgccgtggc
gaccgcaacgaccgtggcccgcgcagcgatcgtaacggtgaagaccgtccgcgtcgcgag
cgtcgtgacgcaggcgatatggaactgtaccgcatcgaagtgggccgtgatgatggcgtt
gaagtacgtcacatcgtgggcgcaatcgccaacgaaggtgatatcagcagccgttacatt
ggtaacatcaagctgtttgcgtcgcactctacgatcgaactgccgaaaggcatgccgacc
gaagtgctgcagcacttcacccgcacgcgtattctgaacaagccgatgaatatgcagctg
atgggcgatgcacagccgcgtggcgatcgtcgtcctgctggcggcggccgtggtttcggc
ggtgaacgtcgtgaaggcggcgagcgtcgtgaaggtggtcgtggcgaaggtcgtcgtttc
agcggcgaacgtcgcgaaggcggtcgtagcttcggcggcgagcgtcgtgaaggtggccgt
ggcccgcgtcgtgatgacgcaaccggccgtcgtcgcttcagcgatgcataa
DBGET
integrated database retrieval system
