Cronobacter muytjensii: AFK63_17235
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Entry
AFK63_17235 CDS
T04067
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmw
Cronobacter muytjensii
Pathway
cmw03420
Nucleotide excision repair
cmw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFK63_17235 (uvrD)
03430 Mismatch repair
AFK63_17235 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmw03400
]
AFK63_17235 (uvrD)
Enzymes [BR:
cmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFK63_17235 (uvrD)
DNA repair and recombination proteins [BR:
cmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK63_17235 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AFK63_17235 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALB72261
LinkDB
All DBs
Position
complement(3739550..3741712)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLMMVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDDGLRPQHIESYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNGIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFQGAQTIRLEQNYRSTNNILNAANALIANN
AGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKVWQENGGALQDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQACRQLLQEKALAGRAASALQRFLELIDALAHDTIDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADAWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIAELPEGCVEEVRLRASVSRPVSHKQLG
APIAQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFNGQGIKWLVAAYARLENV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaacgataaacagcgcgaagccgtagccgcg
ccgcgcagcaatatgctggtgctggcgggcgcaggcagcggtaagacgcgcgtgctggtg
catcgtatcgcctggctgatgatggtggaaaactgttcgccgtactccattatggcggtg
acctttaccaacaaagcggcggcggagatgcgccaccgtatcggccagttgatgggcacc
agccagggcggcatgtgggtcggcacgttccacgggctcgcccatcgtctgctgcgcgcg
caccatatggacgcgaatctcccgcaggatttccagatcctcgacagcgacgatcagctg
cgcctgctcaagcgtcttatcaaggcgatgaatcttgacgagaagcagtggccgccccgt
caggcgatgtggtacatcaacggcaaaaaagatgacggcctgcgcccgcaacatattgag
agctatggcaatccggtagagcagacctggcagaaagtgtatcaggcataccaggaggcg
tgcgatcgcgccggactggtggacttcgccgagctgctgctgcgcgcccatgagctgtgg
cttaacaaaccgcatatcctcaaccactaccgcgagcgtttcactaatattctggtggat
gagtttcaggacaccaacggcattcagtacgcctggatccgcctgctggcgggcgacact
ggcaaggtgatgatcgttggcgacgatgaccagtccatttatggctggcgcggtgcgcag
gtcgaaaacatccagcgcttcctgaacgatttccagggcgcgcagactattcgtctggag
cagaactaccgctctaccaacaatattctaaacgccgccaacgccctgatcgccaataac
gcggggcgtcttggcaaagagctgtggaccgacggcagcgacggcgagcctatctccctc
tactgcgctttcaacgagctggacgaagcgcgctttgtggtcaaccgcatcaaagtgtgg
caggagaatggcggcgcgctgcaggactgcgcgatcctgtatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttacaggcgagcatgccgtaccgcatctacggcggcatg
cgattcttcgaacgccaggagattaaagacgcgctgtcgtatctgcgtcttatcgccaac
cgcaacgacgacgcggcttttgagcgcgtagtgaatacgccgacgcgcggcatcggcgac
cgcacgctggatgtggtgcgtcagaccgcgcgcgatcgccagctcacgctctggcaggcg
tgccgtcagttgttgcaggaaaaagcgctggccggacgcgccgccagcgcgcttcagcgc
ttccttgagcttatcgacgcgctggcgcatgacactatcgatatgccgctgcatgttcag
accgaccgggttatcaaagactccggcctgtggctgatgtatgagcaggaaaaaggcgag
aagggccaggcgcgtatcgaaaacttagaggagctggtgacggcgacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcgtttttgtcccacgcggcgctg
gaagcgggcgaagggcaggccgacgcctggcaggatgcggtgcagctgatgaccctgcac
tccgccaaagggctggagtttccgcaggtatttatcgtcggtatggaagagggcatgttc
ccgagccagatgtcgcttgatgaaggcggtcgtctggaagaagagcgccggctggcctat
gtgggcgtcactcgcgccatgcagaagctgacgctgacctacgcagaaacccgtcgcctg
tacggcaaagaggcgtatcaccgtccgtcgcgctttatcgccgaactgccggaaggttgt
gtggaagaagtacgcctgcgcgcgagcgtcagccgcccggtcagccataagcagctgggc
gcgccgatagcgcagaacgactctggctataagcttggccagcgcgtgcgccacccgaaa
ttcggcgaaggcacgattgtgaatctcgaaggcagcggcgaacacagccgtttgcaggtg
gcgttcaacgggcagggcatcaaatggctggtggccgcctacgcgcgcctcgaaaacgtc
tga
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