Cronobacter muytjensii: AFK63_18915
Help
Entry
AFK63_18915 CDS
T04067
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cmw
Cronobacter muytjensii
Pathway
cmw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK63_18915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmw03400
]
AFK63_18915
Enzymes [BR:
cmw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AFK63_18915
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AFK63_18915
DNA repair and recombination proteins [BR:
cmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFK63_18915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALB72558
LinkDB
All DBs
Position
4130780..4131589
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSDEIHALSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILPEERPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTREL
EGHNVLAHLGPEPLSEAFNGAYLHQKCTKKKVAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQQLQVYGRE
GEPCRVCGAPILAGKHAQRRTYWCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtggaaaccagccgtcgcgggattgagccgcatctggttggc
gaaaccatcctgcacgccgttgtgcgcaatagccggctacgctggccagtttctgatgaa
atccatgcgttaagcgacaaacccgtcctcagcgtgcagcgtcgcgctaaatatctgctg
ctggagctgccggacggctggataattattcatctgggcatgtccggtagcctgcgtatc
ctgccggaggagcgcccggccgagaaacacgaccatgtcgacctggtgatgagtaacggc
aaagtgctgcgctataccgatccgcgccgcttcggcgcctggctatggacgcgcgagctg
gaagggcataacgtcctggcgcatctggggccggagccgctcagcgaggcgtttaacggc
gcgtatctgcatcaaaaatgcacgaaaaagaaagtcgctatcaaaccctggctgatggat
aacaagctcgtggtaggcgtcggcaatatctacgccagcgagtcgctgtttgccgccggg
atccaccccgatcggctggcctcgtcattgtcagaaaaagagtgtgaactactggcgcag
gcgatcaaagcggtactgttgcgatcgattgaacagggcggtacgacgctgcgtgatttt
ctgcaaagcgacggcaagccgggctattttgcgcagcagttgcaggtctacgggcgtgaa
ggcgaaccgtgtcgggtctgcggcgcgccgattctggcagggaaacatgcccagcgccgt
acctactggtgccgacgctgtcagaagtga
DBGET
integrated database retrieval system
