Chelonia mydas (green sea turtle): 102929307
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Entry
102929307 CDS
T02989
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmy03016
]
102929307 (TRUB1)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102929307 (TRUB1)
Transfer RNA biogenesis [BR:
cmy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102929307 (TRUB1)
Prokaryotic type
102929307 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
102929307
NCBI-ProteinID:
XP_007056386
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All DBs
Position
7:complement(110766914..110810720)
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AA seq
290 aa
AA seq
DB search
MAEKVHGTLGHVLANTAAAKLFSLSGLFAVYKPKGPTSANVLNQLKEKLLAEAGIQKCAR
KRKKQILKIGHGGTLDSAAAGVLVVGIGKGTKMLSNILAGSKKYLAIGELGKATDTLDAT
GKVTEEKPYDQITKEDLERVLQKFTGDIMQVPPLYSALKRDGQRLSSLMKKGEAVEAKPA
RPVTVYSLSLQNFQPPLFTLDVECGGGFYVRSLVSDIGKELSSCANVQELTRTKQGPFTL
EEHALHEDKWTIDEIAQSLEHCMSLLAVEPSLKKLKTEHSEESTVNCEDK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaaggtgcacgggacgctggggcatgttctggccaacacagcagcagctaaa
ctcttctccctgagcgggctgttcgctgtgtacaaacccaaggggcccacttcagctaac
gtgctcaaccagctgaaggagaagctgctggcagaagctggtatacaaaagtgtgcaaga
aagaggaaaaaacagattttgaagattggacatggtgggactctagatagtgcagctgca
ggagttctggtggtcggtattggaaaaggaactaaaatgctgagcaacattttggcaggc
tccaagaagtacctggccattggggaattgggaaaagctactgatacattagatgctaca
ggaaaagtaactgaagaaaagccttatgatcagataacaaaagaagatcttgaacgtgtg
ttgcaaaagttcacgggggacataatgcaagttcctccactctattctgctctgaaaaga
gatggacaaaggctgtcgtctctgatgaagaaaggagaagcagtggaagcaaagcctgct
aggccggttacagtatacagcctctctctccaaaacttccagccaccgctgttcacactg
gatgttgaatgtgggggtggcttttatgtgagaagcctggtcagtgacatcggaaaagaa
ctctcttcctgtgccaatgtgcaagagctgacccggaccaaacaaggaccatttacacta
gaggagcatgcacttcatgaagacaaatggacaattgatgaaattgcacagtccttggag
cattgcatgtcgcttcttgcagtagagccatctcttaaaaaattaaagactgagcattct
gaagaatccactgtgaattgtgaagataagtga
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