Chelonia mydas (green sea turtle): 102929487
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Entry
102929487 CDS
T02989
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102929487 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102929487 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
102929487
NCBI-ProteinID:
XP_007065721
LinkDB
All DBs
Position
1:319671899..319742410
Genome browser
AA seq
1786 aa
AA seq
DB search
MGCLQTYLGALLGLWAAALAQEPEYSYGCAEGSCYPATGDLLIGRASQLSASSTCGLHRP
EPYCIVSHLQEDKKCFTCNSLFPFHETLNSDSHLIENVVTTFAPNRLKLWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWKVYRYFAYDCENSFPGVSTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNLLKITNLRISFTKLH
TLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCR
HNTKGLNCELCLDFYHDLPWRPAEGRHSNACKKCNCNGHSIQCHFDMAVYMATGNTSGGV
CDDCQHNTMGRNCEQCKPFYFQHPEREIRDPNICEPCNCDPLGSQNGGICDRYTDFSAGL
IAGQCRCKLFVEGERCDLCKEGFYGLSADNPLGCQSCACNPLGTLPGGNPCDSETGSCYC
KRLATGRHCEQCLPEHWGLSNDMDGCRPCDCDQGGAINNNCSSETGQCPCRPHMIGRQCN
EVESGYYFMSLDHYIYEAEEANFGPGVSIVERQYSQDRIPSWTGIGFVRVPEGAYLEFYI
DNIPYSMEYDVVIRYEPQLPDHWEKAVITVSRPGKIPTSSRCGNTVPDDDNQTVSLSPGS
RYVVLPRPICFEKGLNYTVRLELPQYSSLSTEVESPYTLIDSLVLMPYCKSLDIFTVGGS
GEDMVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCNPQGSL
SSVCDSNGGQCQCRPNVVGRRCDRCAPGTFGFGPNGCKSCECHVQGSVSSFCHPETGQCH
CFHGVYGRQCDRCLPGYWGFPSCPPCQCNGHTDDCDPYTGECLNCRDSTTGHNCERCLGG
YYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPITLQIVCVCNVGYIGSRCGECASG
FFGDPEEIGGVCQPCQCNNNIDMTDPGACDKQSGKCLKCLYQTEGENCQLCKYGYYGHAS
QQDCRKCVCNYLGTVREHCNSSEDCQCEKTTGQCQCLPNVTGQNCDRCAPHTWRLASGTG
CELCECDVARSFGPLCNEFTGQCQCMPGFGGRTCRECQEFFWGDPNVACQACDCDPRGIQ
TPQCNRSTGLCVCKEGVEGPSCDKCTRGYSGIFPDCTPCHQCFALWDVIISELTNRTQRF
LERAKILKISGVSGPYQQTVNTVEEKLNEIKSILAQNPAAEPLKNIGNLFEEAGKLAADV
TEKMAEIEDKLSVIALKSNNTDTHLRALETDAESLDHVVKELAEQLEFIKISDIRGALDS
VTKYFQMSLEAEERVNASSVHPDSLVELSAQTRQEVEDLISEQEAQFKAKQEEQSRLLDE
LAGKLQSLDLSEVAEKTCGTPSGASCADSECGGLNCRTEEGEKKCGGPGCEGLVTVAHSA
WQKAMDFDRDILSALAEVEELSKMVSEAKQRADEAKQNAQKVLLKTNATKEQVDRSNEDL
RNLIKQIREFLMQDSADLDSIEAVANEVLNMKMPSSPQQLQTLTEDIRERVESLSDVEVI
LQQSAGDIARAEMLLDEANKASKSAKDVKVTAAIVKEALEEAEKAQNAAEKAIKQADEDI
RGTQDLLTSIESENAASEETLNNATLRLTELEKNVEDLKQKTATNSENVEEIEETIATVK
QNAEEVKEVLDSELNAKYKTVENLIAKKTEESADARKKAGMLQNEAKSLLAQANSKLQLL
KDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctgcagacgtaccttggcgctctcctagggctgtgggccgccgccctggct
caggagcccgagtacagctacgggtgcgccgagggcagctgctacccggccaccggcgac
ctgctgatcggccgcgcctcgcagctgtccgccagctccacgtgcgggctccaccggccc
gagccctactgcatcgtgagccacctccaggaggacaaaaaatgtttcacctgcaattcc
ctgttccccttccacgagactctcaactccgatagccatcttattgaaaatgtggtcaca
acatttgctccaaaccgcctcaagctgtggtggcagtcagaaaatggtttggaaaatgta
actctccagctggatctggaagctgaattccatttcactcatctcattatgaccttcaag
acattccgcccagctgcaatgctaatagaaagatcatctgattttggaaaaacctggaaa
gtatatagatactttgcatatgactgtgagaactcctttcctggtgtttcaactggaccc
atgaagaaagtagacgatatcatttgtgattcccgatattctgacattgaaccttcaact
gagggagaggtcatatatcgtgctttagatccagcttttagaattgaagacccatatagt
ccaagaattcaaaacctattaaaaatcaccaatttaagaatcagtttcaccaagttacat
acattgggagacaacctcttggattctagaatggaaatcaaagaaaagtactactatgca
atttacgacatggtggttcgtgggaactgtttctgttatggccatgccagtgagtgtgca
ccagtggacggctttaatgaagaggtggaaggaatggtccatgggcactgcatgtgcaga
cataataccaaagggttaaactgtgaactgtgtttggatttctaccatgacttaccatgg
agaccagctgaaggacgccatagtaatgcatgtaaaaagtgcaattgtaatggacactct
atccagtgccattttgatatggctgtatacatggcaaccggaaataccagtggtggagtg
tgtgatgactgccagcataacacaatgggacgcaactgtgaacaatgcaaaccattttac
tttcagcacccagagagagagatacgagatcctaacatttgtgagccatgtaactgtgac
ccacttggctcccaaaatggtggaatatgtgatcgctacactgacttctctgctggcctt
attgctggacagtgccgctgtaaattatttgtggaaggggaacgttgcgacctctgcaaa
gaagggttctatggattaagtgcagataatccccttggttgtcaatcttgtgcatgtaat
cctttgggaactcttcctggagggaatccttgtgattcagagacaggaagctgctattgt
aaacgtctagcaacaggaaggcactgtgagcagtgtctgcctgaacactggggcctgagc
aatgacatggatggatgtcggccttgtgactgtgaccaagggggagcaataaacaataac
tgctcaagtgaaactggccagtgtccgtgccggccccatatgattggacgccagtgcaat
gaagtagagtctggctattacttcatgtcattagaccactacatctatgaggcggaggaa
gccaactttggtcctggagtgagcatagttgagcgccagtattctcaagatcgtatccca
tcctggactggaataggatttgtaagagtccctgaaggggcatatctggaattctatatc
gacaatattccatattctatggagtatgatgttgtgattcgctatgagccgcagttacca
gatcactgggaaaaagctgttattacggtttcacgcccaggcaagattcctacaagtagc
cgatgtggtaataccgttcctgatgatgataatcagactgtatcattatcaccaggctca
agatatgtcgtccttccacgacccatatgctttgaaaagggactgaattacactgttcgt
ctggagctaccacagtactcctccctcagtactgaggtggaaagcccatacacactcatt
gactcgctcgttcttatgccttactgcaaatcactggacatattcacggtggggggctca
ggcgaagatatggtcactaacagtgcttgggaaacgtttcaaagataccgatgtctggaa
aacagcaggagtgttgtgaaaacccctatgactgacgtctgcaagaatattatttttagc
atctctgcactgttacatgagaccgcattatcttgccagtgcaaccctcaaggctcatta
agttcagtgtgtgactctaatggaggacagtgccagtgtcgtccgaatgttgttggaaga
agatgtgacagatgtgctcctggcacctttggctttggacctaatggatgcaaatcttgt
gaatgtcacgtacaaggttctgtcagttccttctgtcatcctgagactggccagtgccac
tgtttccatggagtgtatggccgccaatgtgataggtgcttacctggatactggggattt
ccaagctgtccgccttgccagtgtaatggccacacggatgactgtgacccatacactggg
gaatgtttgaattgccgcgattctaccacgggacacaactgtgaaaggtgccttggtggc
tattatggagaccctgtcctgggatcaggagatcattgtcggccttgcccttgcccagat
ggcccagaaagtgggcgtcagtttgccagcagctgttatcaagatcctattactctgcaa
attgtgtgtgtctgtaatgtgggatacataggaagcagatgtggtgagtgtgcttctggt
ttctttggagaccctgaagagataggtggagtctgccagccatgccagtgtaacaacaac
attgacatgactgacccaggggcctgtgacaagcagtctggaaagtgcctgaagtgcttg
tatcagacagagggtgaaaattgccagctgtgtaaatatgggtactatggacatgcgtcg
caacaggattgcagaaagtgcgtctgtaattacttgggaacagtgcgagagcactgcaat
agctcagaagactgtcagtgtgagaaaacaaccggccagtgccaatgccttcccaatgtg
accgggcagaactgtgatcgctgtgcaccacacacttggagactggccagtggaactgga
tgtgaactgtgcgagtgcgatgttgctcgttccttcgggccattgtgtaatgagttcacg
gggcagtgtcagtgcatgcctgggtttggaggccgcacctgcagggagtgccaagagttt
ttctggggtgaccccaatgtggcatgccaagcttgtgattgtgatccccgtggaatccag
acacctcagtgcaatcgctccacggggctgtgcgtctgtaaggagggtgtcgagggaccc
agctgtgacaagtgcacccgcggctactctggcatcttccctgactgcacgccatgccat
cagtgtttcgctctgtgggacgtcatcattagtgaactgaccaataggacacagcggttc
ctggaaagagcaaaaatcctgaaaatcagtggggtcagtggcccttaccagcaaactgtc
aacactgtggaagagaaactgaatgaaattaaaagtatccttgctcaaaatccagctgca
gagccccttaaaaacattggaaatctctttgaggaagcaggcaaactagcagcagatgtt
acagaaaagatggctgaaatagaagacaagctctccgtgatagcgttaaaaagcaataac
acggacactcacctgagggccctggagacagatgcagagagcctagaccacgttgtgaaa
gaacttgcagaacaactcgagtttataaaaatctctgatatccggggagccttggatagt
gtcaccaaatattttcagatgtccctggaggcagaagagagggtcaatgcctccagtgtt
caccctgatagccttgtggaactgtcagctcagacacgacaggaagtggaagacttaatc
agtgagcaagaggcccagttcaaggcaaaacaagaagaacagtcacgccttctggatgaa
ctcgcaggcaagctgcaaagtctggatctttctgaagtggctgagaagacatgcggaact
ccctcaggggcttcctgtgctgactcagagtgtggcggtctgaactgccgaacagaggaa
ggagaaaagaaatgtggaggaccaggctgcgagggattggttactgtggctcacagtgcg
tggcagaaagccatggattttgacagagacatactcagtgccttggcggaagttgaagaa
ctctctaaaatggtctcagaggcaaaacagagagcagacgaagcaaaacaaaatgcacaa
aaagttttgctcaaaaccaatgccacaaaagaacaagtggacagaagcaatgaagatctg
agaaaccttattaagcagatcagggaatttctgatgcaggatagcgctgatttggatagc
attgaggcggttgctaatgaagtgttgaacatgaaaatgccaagtagcccccagcagcta
cagaccctgacagaggatatccgtgagcgtgtggaaagcctttctgatgtagaggttatc
ttacaacaaagtgccggagacattgccagagctgagatgctgttagatgaagcaaataaa
gcaagcaaaagtgcaaaagatgttaaagtcactgcagctatcgtgaaagaagcactggaa
gaagctgaaaaggcccaaaatgcagctgaaaaggccatcaaacaagctgatgaagacatc
agaggaacacaggacctacttacctcaattgaatctgaaaatgcagcatctgaagaaacc
ttaaacaacgctaccctacggcttactgagctagagaagaatgtggaagatcttaaacaa
aagactgctacaaattcagagaatgtggaagagattgaagaaaccattgctactgtgaaa
caaaatgccgaagaagttaaagaggtacttgacagtgaactgaacgccaaatataaaacc
gttgaaaacctaattgccaaaaaaacagaagagtctgctgatgccaggaagaaagctgga
atgctgcagaatgaagctaaatcattgttagctcaagcaaacagcaaactccagctgctc
aaggatttggaaagcacgtatgagaacaatcagaaagtcttggaagacaaagccaaacag
ttggtggaactagaagaaacagtacgctccctcttacaggcaatcagccagaaagttgca
gtatacagcacctgcttgtaa
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