Chelonia mydas (green sea turtle): 102929520
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Entry
102929520 CDS
T02989
Symbol
STAB1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102929520 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmy00536
]
102929520 (STAB1)
Glycosaminoglycan binding proteins [BR:
cmy00536
]
Hyaluronan
Cell surface receptors
102929520 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
FXa_inhibition
EGF
EGF_TEN
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
102929520
NCBI-ProteinID:
XP_037760263
LinkDB
All DBs
Position
7:complement(42584318..42682965)
Genome browser
AA seq
2658 aa
AA seq
DB search
MFDVKSSRITSVYFGIGDSECESVFSLFMFNLWFFLDLILSRRSYLTEIAYSTSTPPLQE
KGPICKSMKMHPPGLLFSFLAAWFISTVEGQSQKLKSMHCNVKTMFTLATPCTSCAAAPK
VVCPKGWIKMTQALGERGCRYTVKLGEDTLSLPGCSHMCKMEIEKKKCCPGFWGTECYEC
PGGPEKPCSGHGTCLDGITRNGTCTCEGRYGGSACQDCLDESLFGPDCQSVCDCQHGVCN
HGISGDGSCTCHGGYTGPKCDQELPLCRGVVCGNNAQCVLMNGMAICDCMPGYRKRGSIC
QAQDPCTSSPCSSLAVCKVLRPGKYECTCKDGYHGDGKVCQPINPCITNNGGCPENSTIC
LYKGPGKSSCVCKPGMSGPYPSAGCSSVSECQRYFCDMTAKCKINPDGTASCVCKDGEIG
DGRSCYKNVMSEISQLNTRGRWYKKLSSANKMFASGCSLALTKYGPFTVFVPSLQPYSGR
TDFNDTTAQHLCKMHIIPGQHLVEDMVKIKTLWTLSGHQLTFNDQIKSYSKSFRYQDQPG
VLYTVIQSNIPASNGIIHIVNTLRKTTSFRSLGNPQKTIGEILASMEIFSRFETILENCG
LPSILDGPGPFTVFVPSNNGVDKLRDGRLIYLFTEGINKLQELVKHHIYTAAAVTVEKLT
TMPQIITMANQILTVNISEDGRILLDDSGIPLIKRDIVASNGIIHTLDGIFIPPSIIPIL
PQRCNEEQHKIIAGSCVDCGALNTSVCPPHSIEMAQGNYPSECVYVHDPLGFNVLKKGCA
RYCNQTILKPGCCKGFFGPDCTPCPGGFSNPCYGRGNCSDGLQGNGNCLCFEGFKGIACH
ICSNPNKHGENCDEDCGCIHGICDNRPGSGGTCQSRSCKDGYTGEFCDRSSQNCGPTASQ
YCHQNAVCSFNNTARCICTDGYEGDGFSCLPIDLCRKPERGGCSENAICTSTGPGTATCQ
CNKGWTGDGKACVAIDNCVLETRGGCHMNADCSFVGPGQSKCMCKRGYAGDGYNCDPINP
CKLDNGGCHDLAACKPLGGGERSCACAPGYMGDGFTCYGDVLKELARNSHFAGFYEWIKK
SLFSIPAGVNVTVLVPSEAAIRNLSQAEKDFWLKPYTLPFLVRAHFLQGSFTSEKLKEYK
GEELPTLNPRTRWEITNSSGAITIQNAIIVVADIPAINGTIYILNKVLLPPLGDIPPSRP
GLQQQLDMVPAFTLFKELLLQYQLIGKIESSEKYTIFVPGNNSIEEYCHASNITQLDNDT
VQYHVVLGEKLSSTDLKNGVHKSTMLGFSYWLMFYKNNNQTFVNNVLLDGKFFETKNGML
IGVSGVLQIQKNRCTANTTVIQKSKCAKCDRGIKCPSGSVLAETPEKGKMPHCAYKSGLS
KVVGCYFTCVKVSLVSICCPGYYGHMCEMCPGKPGSSCSGNGVCQDGITGSGECRCHEGF
HGTACEMCEVGRYGVGCKSVCTCRNGICNDGLHGDGSCECFQGWEGITCERRIGIDLCNN
TCHLMANCINGSVDSLPTCFCSAGYTGNGTYCSAINPCVIDNGGCSVYATCTNVSAGENT
CTCKEGYAGDGTLCQEIDGCLERNGNCHSYAECTKTGPNLVACNCLPGYSGDGVKQCVPI
NLCSENNGGCSRFGFCKYTGPGTRNCSCGWGHVGDGFTCRGNVYQELLRSEAASEFFKQL
LAFKIKELSGEGPFTIFVPHADSIQNSTTFSEWKNKSLIKDLLRYHIVSCRKLLASELET
HKSITALSGHKIRIVVKENSVHLNEEAVIITSDIVGKNGVIHIIDKILIPADLQSLNISS
HLAQQSITEVAESYGYKIYSKLLQEAELLSLVNNSAHRPFTMLWPTDAVFNALPEKMQTW
LYSKDHRDKLAAYLKMHMIRDTKIVAGNLPHIASVRTMHGSTISFSCSKNNVGELLVDNG
NAKIVQRHMEFDGGIAYGIDQLLEPPNLGSRCDDFLSVELRGSVESCGVCGFEPSCPAGS
VQWGKSQTCFYYENPFSRFSYFSHRNYLLSRPHWYPSVFDNGSRWHSLRRSLTKGCRRVC
FSTSWVPQCCANHYGRDCQVCPGGLEAPCSNRGTCDDRIDGSGRCNCTEAFIGTACELCA
PGRYGPGCQECKCTENGMCNEGLNGDGICFCTEEWTGERCETKLAATPVCSPACHPNASC
RADNICECNLHYEGDGRTCTVIDQCRDYNGGCSEHANCTQVGVQLSCTCLPDYQGDGYVC
SPIDRCADGRNGDCSEHALCISTGPNARKCECKAGYVGNGIQCLEEAVPPTNRCLEENGH
CHPEAICTDLHFHDKTVGVFHLQSPRGKYSFTYGEAEAACLAEDAALATLQQLLAAQQMG
FHLCLVGWLNNGTAGYPTVYPTPSCGSNHIGIVDYGSRKNLTERWDAFCYRAKDVRCNCR
DGFIGDGYSCSGNLLAVLAEHSNFSTFYSMLLDYTNATQDGLEFLNFLSNDTTYKTLFVP
LNSGFGVNMKLTWEELKLHVSLSDVLLLSSNLTNGTVIPSCSGYNLLIADAPLLNSTQPP
GSKVVNNTLIVQWDILTFNGIIHAIEGPLRMPRQPVHLNQVTNATKSSPPVTIGVTSAAV
VVLLLFAVAGVSYYYQKIKTPGFQFHYFQADLEEEEQARNPPLVSFPNPLFGAQSLMCEP
FEDSFRGEDLSDTHRILE
NT seq
7977 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgttaaaagtagcagaattacttctgtatactttggaataggagattcagag
tgcgaaagtgttttctccctgtttatgtttaatctctggtttttcttggatctgattctt
agtaggcggtcttatcttactgaaattgcatactctacatcaacccccccccttcaagaa
aagggtcccatctgtaaaagcatgaaaatgcatcctcctgggttactgttttccttctta
gcagcatggttcatttccacagttgaagggcagagtcagaagttaaaatccatgcactgc
aatgtcaagacgatgttcaccttggctacaccgtgcacctcctgtgctgcggcccccaaa
gtggtgtgtccaaaagggtggataaagatgacgcaggcattaggagagagaggctgcaga
tacaccgtaaagcttggagaagacaccctttccctaccagggtgcagtcacatgtgtaag
atggaaattgagaagaaaaaatgctgcccaggattctggggtactgagtgctatgaatgc
cctggtggacctgaaaagccctgcagtggccatggaacctgtttggatggtataacacgg
aatggaacctgcacctgtgaggggagatatggcggctctgcctgtcaagattgtctggat
gagagtctgtttggccctgactgtcaatcagtgtgtgactgtcagcatggagtgtgcaac
cacgggatctctggtgatggaagctgtacctgccatggaggttacactggcccgaagtgt
gatcaagaacttcccctttgcagaggtgtagtctgcgggaacaatgcccagtgtgtgttg
atgaacgggatggcaatatgtgactgcatgccagggtatagaaagagagggagcatatgc
caagctcaggatccttgtacttcatcaccatgctcctcgttagctgtctgtaaggttcta
agaccaggaaaatatgaatgcacttgcaaagatggttatcatggagatgggaaggtatgc
caacctatcaatccatgcattaccaataatggaggctgccctgagaattccaccatctgt
ctctataaaggcccaggaaagtcatcttgtgtgtgtaagcctggaatgagtggcccctac
ccttcagcaggctgctcatctgtcagtgagtgtcagcggtacttctgtgacatgactgca
aaatgtaaaatcaatccagatgggactgccagctgtgtctgcaaagatggggagattgga
gatgggagaagttgctacaaaaatgtcatgagtgagatctctcagttgaatactcgagga
agatggtacaagaaattaagcagtgcaaacaaaatgtttgcttcagggtgttctttggca
ctgacaaaatatgggcctttcacagtctttgtgccaagccttcaaccgtatagtggaaga
actgacttcaacgacacaactgcccagcatttatgcaaaatgcatataattcctggtcag
catttggtggaagatatggtcaagatcaagacgctgtggacgttgtctgggcatcagctc
acgtttaatgatcagataaagtcctacagcaagagctttaggtatcaagaccagccaggg
gtattgtataccgtcattcagtcgaacataccagcatccaatggaattatacatattgtt
aacactctaaggaaaacaaccagctttcgcagccttggaaatccacagaaaaccattggg
gagatccttgcttcaatggagatcttcagtcgatttgaaactatcctggagaactgtggc
ctgccttcaatactggatggaccaggacccttcactgtgtttgtgccaagcaacaatgga
gtggataagttaagagatgggaggcttatttatctttttacagaggggataaataagctt
caggagcttgtgaaacatcatatctacactgcagcagcggtgactgtggagaaactgaca
acgatgccacagattataaccatggcaaaccagatactgactgtcaatatcagtgaggat
gggagaattctgttggatgattctggcattcccttgatcaagagggacattgtggcgtca
aatggaatcattcataccttggatggcatcttcattcccccttcgataatccccattctg
ccacagaggtgcaatgaagaacagcacaaaatcatagcaggctcttgtgttgattgtggg
gccttgaacaccagcgtttgccctcctcacagcatagaaatggctcaggggaactatcca
agtgaatgtgtctatgtccatgatccattaggcttcaacgtcctgaaaaagggctgtgcc
aggtactgcaatcaaaccattctgaaacctgggtgctgcaaaggattctttggtcctgac
tgcactccatgccctggtggattctccaatccatgctacggcagagggaattgtagtgat
gggcttcaagggaatggcaactgtctctgctttgagggtttcaaaggaatagcctgccac
atctgctcaaacccaaacaagcatggggagaactgtgatgaagattgtggttgtatccat
ggaatttgtgataacaggccaggcagcgggggaacgtgccagtcccgttcatgtaaggat
ggctataccggggaattctgcgacagaagttctcagaactgtggcccgactgcatctcag
tattgtcaccagaacgcagtctgcagcttcaacaacacagcaaggtgcatctgtactgat
ggctatgaaggggatggattttcctgcctgcccattgatctgtgtaggaagccagaacga
ggaggctgttcagaaaatgccatatgtaccagtacaggccctggtactgccacgtgtcag
tgtaacaagggctggactggggatggcaaagcctgtgttgctatagataactgtgtgctg
gagaccagagggggctgccacatgaatgcagactgcagctttgttggacctgggcagagc
aagtgtatgtgcaagaggggctatgctggtgatggctataactgcgaccccattaatcct
tgcaagctggacaatggtggctgccatgatttggctgcgtgcaagcctcttggaggaggg
gagaggtcctgtgcttgcgctcccggttacatgggagatggatttacatgttatggagat
gtattaaaggagctggccaggaattcccactttgcaggcttctatgagtggattaagaag
tctctcttcagcatcccggcaggagtcaatgtcactgttttggtgccctcagaagccgcc
atcagaaacctgagccaggccgaaaaagatttctggctgaagccctatacgctgccattt
ttagtcagggcccattttctccaaggttccttcaccagtgagaagctcaaagagtacaag
ggtgaggagttacccactctcaatccacggaccagatgggagataaccaacagcagtggc
gctataaccattcagaatgcaatcattgtagtagctgacattcctgctattaatggcact
atttatatcctaaataaggttttgttaccacctttaggagatatcccaccaagtcgcccc
ggtctgcagcaacagcttgatatggtccccgcatttactctgttcaaggagttgttactg
cagtaccagctgattggaaaaattgagtcctctgaaaaatataccatttttgtcccagga
aacaattcaattgaggaatattgccacgcttccaacattacccaactggataatgacact
gtgcagtaccatgttgtacttggagagaagctctcctctacagacttgaaaaatggagtc
cataaaagcacaatgttaggattctcctactggctaatgttttataaaaacaacaaccag
acatttgtaaacaacgtcctcttagatggtaaatttttcgaaaccaagaatgggatgttg
attggggtttctggggttctacagattcagaaaaatcgttgcactgccaataccacagtg
attcagaagtcgaaatgtgctaagtgtgacagagggatcaagtgtccttctggatcggtc
ctggcggaaactccagaaaaagggaagatgccacactgtgcatataagtctggattatca
aaagtagttggttgttatttcacctgtgttaaagtttccttagtctctatctgctgtcca
ggttactatggacatatgtgtgagatgtgcccaggaaagccaggcagctcgtgttctggg
aacggagtgtgccaggatggcattactggcagcggggagtgtcgctgtcatgaaggcttc
cacggcacagcctgtgagatgtgtgaagtgggcagatacggagtgggttgtaaatcagtg
tgtacttgcagaaatggaatctgtaatgatgggttgcacggagatgggagctgcgaatgt
ttccaaggttgggagggcatcacctgtgaaagaagaattgggattgatttgtgtaataac
acttgccacctgatggccaattgcattaatggctctgtagattccctgcctacttgcttc
tgctctgctggatacactgggaatggaacatattgctcagcaataaatccatgtgtgatt
gataatggcggttgctccgtatatgcaacgtgtactaatgtctctgctggagagaatact
tgtacttgtaaggaaggctatgctggagatgggactctgtgccaggaaatcgatggctgt
ctagagcgcaatgggaattgccacagctatgcagagtgtactaaaacaggcccaaatctg
gttgcttgtaactgtcttcctggctacagtggagatggtgtgaaacaatgtgtccccatc
aatctttgcagtgagaataatggaggctgtagtagatttggtttctgcaagtacactgga
cctgggactcgaaactgctcctgtggttggggccatgttggagatgggttcacttgcaga
ggcaatgtgtatcaggagctcctgagaagcgaagcagcatccgagttctttaagcagtta
ctggccttcaaaatcaaggagttaagtggggaggggcctttcaccatctttgttccacat
gcagattcaatacaaaacagtacaacgttcagtgaatggaagaacaaaagcctcatcaaa
gatttgcttcgctatcacatagtgagttgtcggaaactgctggccagcgaactggagacg
cacaagtccatcacggctttgtcaggacacaaaataaggattgtggtgaaagagaatagt
gtgcatctaaatgaggaggcagtgatcatcaccagtgacattgttggcaagaatggggtg
atccatatcattgacaagattttaatccctgctgatttgcagagtctgaacatttcttcc
cacctagcacagcaaagcatcactgaggtggcagaatcatatggctacaaaatctacagc
aaactactccaggaagcagaactgctatctctggttaacaactctgctcacagacccttc
accatgctgtggcctactgatgctgtgtttaacgccctgcctgagaagatgcaaacgtgg
ttgtatagtaaagaccacagggacaagctggcagcctatctcaaaatgcacatgattagg
gacacgaagattgtagctggtaacctgccacacattgcttctgtaaggaccatgcatgga
tccaccatctcgtttagctgcagcaagaacaatgtcggggagctcttagtggacaatggc
aatgccaagattgtccagaggcacatggagtttgatgggggcattgcctatggcattgat
cagctgttggagcccccgaacctggggtcccgctgtgatgatttcctctccgttgagctc
aggggttcagttgagagctgtggtgtttgtggtttcgagccttcctgtcccgctggatca
gttcaatggggcaaaagccagacttgcttttattacgaaaatccattttccagattctct
tatttttcacaccgcaactatctgttatcaagacctcattggtacccgtcagtgtttgat
aacggcagtcgctggcattctcttcggaggtccctgacaaaagggtgcaggagggtctgt
ttctccaccagctgggtaccgcagtgctgtgcaaaccactatggaagagactgtcaggtc
tgcccaggagggctggaggctccctgcagtaaccgtggtacttgtgatgataggatcgat
gggtcaggacgatgcaactgcaccgaggctttcattgggacggcttgtgaactgtgtgcg
ccaggcagatacgggccgggctgccaagagtgtaagtgcacagagaatgggatgtgtaat
gaaggcttgaatggggatgggatctgtttctgcactgaggaatggacaggagagcgctgc
gaaaccaaactagctgcaacgccggtgtgttccccagcttgccaccccaatgcctcctgc
cgagctgataatatctgtgaatgcaacttacattatgaaggagatggaagaacttgcaca
gtgattgaccagtgccgggattacaatggagggtgcagcgagcatgccaactgcactcag
gtgggtgttcagctctcctgtacctgcctaccggattaccagggagatggctacgtctgc
agccccatagacaggtgtgcggatggcaggaatggagactgcagcgagcacgccttgtgc
atcagcactgggccaaacgctcggaagtgtgagtgcaaagcgggttatgttggcaacgga
attcagtgcctggaggaagctgtgccacccaccaaccgctgcctggaagagaacgggcac
tgccaccccgaggccatttgcactgatctgcactttcatgacaaaaccgttggcgtgttc
cacctccaatcgccaagagggaagtacagcttcacctacggggaggctgaggctgcctgc
ctggctgaagacgctgctttggccactctccaacagctcttagcagctcagcagatgggt
ttccatctatgcttagttggttggctcaataatggcactgcaggatacccaactgtatac
ccgacccccagctgtggctccaaccacattggcattgtggattatggctcccgaaaaaac
ttgactgagaggtgggatgctttctgctacagagctaaagatgtgaggtgtaattgtaga
gatgggttcattggagacggctactcctgcagtggaaatctcctggctgtgctggctgag
cactccaacttttcaaccttctattctatgttactggattacaccaacgccacgcaagat
ggacttgagttcctcaacttcctctccaatgacaccacatataaaactctctttgtaccc
ttgaattctggctttggggtcaatatgaaattaacatgggaggagctgaagctccatgtc
tccctgagtgatgttctcctcttgagctccaatctcaccaatggtaccgttataccttcc
tgctccggctacaaccttctcattgcagatgctcccctgctgaatagcacgcagccccct
ggttccaaagtggttaataataccctaatagtacagtgggacattctgactttcaatgga
atcattcatgccatcgaggggccactgaggatgcctcggcagcctgtgcacctgaatcag
gttactaatgctacaaaatcatctcctcctgtgaccatcggggtaacatccgctgctgtt
gtggtgctgctgttattcgctgttgccggcgtgtcctattactaccaaaaaataaaaacc
ccaggattccagttccactactttcaggctgacctggaagaggaagagcaggccaggaac
ccgcccttagtgtcattcccaaatcctctctttggggcccagagcttgatgtgtgaacca
tttgaggactctttcaggggggaagatttatcagacacccacagaattcttgagtaa
DBGET
integrated database retrieval system