Chelonia mydas (green sea turtle): 102929543
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Entry
102929543 CDS
T02989
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X2
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102929543 (DSCAML1)
Cell adhesion molecules [BR:
cmy04515
]
Immunoglobulin superfamily
DSCAM family
102929543 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Interfer-bind
Receptor_2B4
Ig_C17orf99
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
102929543
NCBI-ProteinID:
XP_037738425
LinkDB
All DBs
Position
22:complement(17740627..18094225)
Genome browser
AA seq
2039 aa
AA seq
DB search
MWLVTFFLLYSLQKAHTDDVGTSLYFVNDSIQQVTFSSTVGVVISCPAAGSPSAALRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITFYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTILDGFQSREVKAGQ
LVELPCIASGYPNPAIRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLHVSLTPKKLKTGIGSTVILSCALSGSPEYALRWYRNTDLVVLDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKAQTAQDFSIIALEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTITWALDDEPIQRDNEHRTNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCAARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
ALLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNAAATVSRERQLVVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQMKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQY
MLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPAPAI
KWTKDSEDSAIPVAVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSTERSFK
LDGLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHLNSTHARLNLQ
GWSSGGCPIVAIVLEYRPKGNWVWQSLKTNNSNEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTP
SEPGICRFTASPPKPQDSDRGKNVAVPIPHRANKSDYCNLPLYVKSEAFFRKPDIHDPCP
VVPPREASIRNLARAYHTQARHMTLDPGSKPLGLPHPGSSTTTLPQRTLTMPVSANSASA
PAASAPAADPAPAASAEPRMPTHTKMGGSRDSLLEMSTSGIGRSQKQGAGAYSKSYTLV
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttttcctgctgtactctttgcagaaagcacacactgacgatgtt
ggaaccagtctctactttgtgaacgactctatccagcaggtgaccttctccagcacagtc
ggggtggtgatctcctgccccgcagcagggtcacccagcgccgcccttcgctggtacctc
gccacaggggacgacatctatgatgtaccgcacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaatgactac
ttctgtaccgcggagaactcggcgggcaaaatcaggagtcccaatatccgtgttaaagca
gttttcagggaaccttacaccgtccgggtggaggatcaaaggtcaatgcgtggaaacgtg
gctgtcttcaagtgcctcatcccttcttcagtgcaggaatacgttagtgttgtgtcctgg
gagaaagatactgtttctatcatcccagaaaataggttttttattactttttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagtggagagacacgccagagcaatggggctaggctctccgtgtcagaccca
gcagaatccatccctaccatcctagatggctttcagtccagggaggtaaaggcaggccag
ctggtggagcttccgtgcatcgcctccgggtacccgaacccagccatccggtggatcaag
gacgggcggccactccctgcagacagcaggtggaccaagcgcatcacaggactgacaatc
agtgacctgcgtgtggaggacagtgggacgtacatctgtgaggtcacaaacaccttcggg
tcggccgaagtcaccgggaccctcacagtcatagaccctctgcacgtgagcctcacgcca
aagaagctgaagacgggcattggcagcacagtcatcctctcctgcgccctcagcggctcg
ccggagtatgccctccgttggtaccgcaacacagacctggtggtgctggacgactacatc
tccatccgggggattagcaacgagaccctcctcatcactgccgcgcagaagagccactct
ggggcctaccagtgtttcgccacccggaaagcccaaacggcgcaggacttctccatcatt
gcgctggaggatgggaccccccggatcgtctcctccttcagcgagaaagtggtcaacccg
ggcgagcagttctccctgatgtgtgccgccaaaggcgctcccccacccaccatcacctgg
gccctggacgatgagcccatccagagggacaacgagcaccgcaccaatcagtacaccatg
tcagacggcaccaccgtgagccacatgaacgtcaccagcccgcagatcaaggacggaggg
gtgtaccggtgcgccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagtatccgagccatgaagaatataacggcagtggcgggtagggat
accttcatcaactgcagggtgatcgggtatccatactattccatcaagtggtacaaggat
gccttgctgctgccagataaccaccgccaggtggtctttgagaacgggacccttaagctg
atggatgtgcagaagggcatggatgaaggggagtatctctgcagcgtcctgatccagccg
cagctctctatcagccagagcgtccacgttaccgtgaaagtccctcccctgatccagccc
tttgagttcccaccggcctcgattggccagctcctctacatcccctgcgtggtctcctcg
ggggacatgcccatccgcatcacctggcggaaggatgggcaggtgatcatctctggctcg
ggggtcactatcgagagcaaagagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactacacgtgcatcgccagcaacgccgccgccaccgtgagccgcgag
cggcagctggtcgtgcgagtgccgcctcgtttcgtggtccagcccaacaaccaggatggc
atctatggcaaagcgggggtgctgaactgctctgtggatgggtatccccctcccaaggtc
atgtggaagcatgcaaaaggaagcgggaacccccagcagtaccatcctgtgcccctcacg
ggccgcattcaaatccttcccaacagctcgctgcttattcgtcatgtgctggaggaggac
attggctattacctttgccaggccagcaacggtgtggggacggatatcagcaagtccatg
ttcctcactgtcaagatcccagccatgatcacttcccaccccaataccaccattgcgatc
aagggccagatgaaggagctgaattgcacagcccgaggggagcggccaatcatcattcgc
tgggagaaaggcgacaccgtcatcgaccccgaccgcaacatgagatatgccattaccacc
aaggataatggtgacgaggtcatttcaacgctcaagcttaaaccagccgaccggggggac
tccgtcttcttctcctgccacgcgatcaattcttatggtgaagatagaggattgatccag
ctcactgtccaagagcctcctgacccgccagagctggaaattcgcgaggtgaaagcccga
agcatgaacttgcgttggactcagagatttgatggaaacagcatcatcactgggtttgat
attgaatacaagaataaatctgattcctgggattttaagcaatctacccgcaacatctct
cccaccattaaccaggctaatatagtggacctgcatccagcctccgtgtacagcatccgc
atgtactccttcaacaagattgggcgcagcgagccgagcaaggagctcaccatcagcacc
gaggaagcagctccggatgggcccccaatggatgtcaccttgcagccaatgacatcgcag
agcatccaggtcacctggaaggccccaaagaaggaactccagaatggggtgatccgtggc
taccagattggctaccgggaaaacagccccggcagcaatgggcaatacagcattgtggag
atgaaggccacgggggacagtgaggtctacaccttggacaacctgaagaagtttgcacag
tatggggtcgtggtgcaggcgttcaaccgcgcggggacggggccctcctccagcgagatc
aatgccaccacgctcgaggatgttcccagccagcccccggagaacgtgagggcattatcc
atcacatcagatgtggctgtgatctcctggtcagagcccccgcgcagtaccctgaatggt
gtgctcaaggggtacagggtgatcttctggtctctctatatggatggagaatggggggag
atgcagaatatcaccaccacgcgggagcgagtggagttgcgcggaatggagaagttcacc
aactacagtgtccaggttctggcgtacacacaggccggcgatggtgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggcccccccgctgggataaaagctgtcccg
tcttctgccagcagcgtggtcgtgtcctggcttcccccagctaagccgaatgggatcatc
cggaagtatactatcttctgttccagccccgggtccggacagccggcccccagcgagtac
gagaccagccccgagcaactcttctaccgcatcgcccacctcaaccgcgggcagcagtac
atgttgtgggtggcggctgtgacctcggcgggacgtggcaacatcagtgaaaaggtcacc
attgagcctgctgggaaagccccagccaagatcatctcctttggcggcactgtcaccact
ccgtggatgaaggatgtcaggctgccatgcaattcagttggggagccggcccctgccatt
aaatggacaaaggacagcgaggattctgccattccggtggcagtggacggacaccggctg
atccaggccaacggcacgctggtcctgcgctcggtgaaagctgaggattctgggtattac
acctgcactgccaccaacacatggggctttgataccatcatcattaacctgctggtgcaa
gttcccccagaccagccacgcttgactgtatctaaaacctcagcttcatccatcacgttg
gcctggattcctggggacaatggcggcagctccatcagaggctttgtgctgcagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctccaccgaacgctcgttcaag
ctggacggcctcaagtgcggcacgtggtacaaggtgaagctggcagctaagaacagcgtg
ggggccggccggatcagtgagatcatcgaggccaagacgcacggcagagagccctccttc
agcaaggaccagcacctcttcacccaccttaattctacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcgtggccattgtcctggagtaccggcccaagggc
aactgggtctggcagagcctcaagaccaacaactccaacgaggtcttcctgacggagctg
cgcgaggccacctggtacgagctccggatgaaggcctgcaacagcgccggctgcggtaac
gagaccacccagttcgccacgctggactacgacggcagtaccatacccccaatcaaatct
gctcagggggagggggatgacgtgaagaagcttttcaccattgcctgccctgtgatcctg
gctacgctcggggtggccctgctcttcatcatccgcaagaagaggaaggagaagcgtctg
aagagattgagagatgcaaagagcttggcagaaatgctaataagcaagaataaccggagc
tttgacacaccagtgaaagggcccccccagggtccccggctgcatatcgatattcctcgt
gtccagctgctcattgaggataaggagggcatcaagcagctgggggatgataaagctaca
ataccagtgacagacacagagttcagccaagctgtgaatccccagagcttctgcactggg
gtatccttgcatcatccagctctgatacagaacaccggacccttgattgacatgtctgac
attcgacccggtaccaacccagtttcccggaagagcgtgaaatctgcacacagcacccgg
aacaggtactccagccaatggactctcaccaaatgccaggcatctactcctgcacgtact
cttacatctgactggaggactgtgggatcccagcatggaattacggtcacagagagtgac
agctacagtgccagtttatctcaggacacggacaaagggcggaacagcatggtgtctacg
gagagcgcctcatccacctacgaggagctggcacgggcctatgagcacgccaagctcgag
gagcaattgcagcatgccaagttcgagatcacagagtgcttcatctcagatagctcttcc
gaccaaatgaccacagggaccaatgagaacgcagacagcatgacctccatgagcaccccg
tccgagccaggcatctgcaggttcaccgcctccccgcccaagccgcaggacagcgacaga
ggcaagaacgtggcagtgcccatcccacacagagctaacaagagcgattactgcaacctt
cccttgtacgtgaaatcagaagcattcttccgcaagcctgacatccacgatccttgtcca
gtggtcccgcccagggaagcctccatccgaaacctagccagggcttatcacacgcaagcg
aggcatatgacgctagacccaggcagcaagcctttgggcctgccacacccgggctcctcc
acaactactttacctcaaagaacactcaccatgcctgtctcggcaaactccgcttctgct
cctgccgcttctgctcctgccgccgatcccgctcctgccgccagcgctgagccacgcatg
cccacacacaccaagatgggaggctctagagactctttactagaaatgagcacatccggt
atagggagatctcaaaaacaaggggctggagcgtactccaaatcctacactcttgtgtag
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integrated database retrieval system
