KEGG   Chelonia mydas (green sea turtle): 102929618
Entry
102929618         CDS       T02989                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X3
  KO
K14323  protein CASC3
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03013  Nucleocytoplasmic transport
cmy03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102929618 (CASC3)
   03015 mRNA surveillance pathway
    102929618 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102929618 (CASC3)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102929618 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 102929618
NCBI-ProteinID: XP_037742706
LinkDB
Position
27:13043562..13064612
AA seq 711 aa
MADRRRQRASQDSEDESDSAASDSVDSPAGAARSGSPASPPRPARSAAGTLPAGGRGRGA
ESAAGAAKSPQESECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEESSKVELKQESNNA
SESTGKAEKGEEKPDPKGAVTGERQSGDGQESTEPAENKVGKKVPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQAQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRMRKPRFGSPPQREPNWANERQNKPPRHQDSDSAPLPTRTFISRHS
AGMGRMPPARNVPRVGGYKENRPSYRAVEANSQHLSRTGEQAKHESSYRARRVEQAPERD
PSPEAESAHVHSSPAKKEEIILESQTPSTDSVQPPPDRPIEKKSYSRARRTRNKAGDAGK
LADEVPPPEGLTPVPPKPVQVVTPPPPAKAGSWETPVESSMDGLEQDMTQLNLTEQSWTQ
GQPPFIPPRELRGIPNHMHMGAGPPPPFNRMEEMGVQGGRAKRYSSQRQRPPVPEPAPPM
HISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLANPG
LYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYPSTQAQA
QVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSTSEKSKERSNT
NT seq 2136 nt   +upstreamnt  +downstreamnt
atggcggacaggcggcggcagcgggcctcccaggacagtgaggacgagtccgactcggcc
gcctccgacagcgtcgactccccggccggcgcggcccgctccggctcccccgcctcgccc
ccgagaccggcccggagcgccgccgggaccctgccggccgggggccggggccgcggggcc
gagagcgcggccggggccgccaagagcccgcaggagtccgagtgtgaaagtgaagatggc
atcgaaggagatgctgttctctcggattatgaaagtgcagaagactccgaggctgaggaa
ggggagtacagtgaggaggaaagctcaaaggtggagctgaagcaggagagtaacaatgcc
agtgaatccacaggaaaagcagagaaaggggaagagaaacctgacccgaaaggtgctgtg
actggcgagagacaaagcggggatgggcaggagagcactgaaccagctgagaataaagtt
gggaaaaaggtccccaagcacttggatgatgatgaggatcggaagaaccctgcttacata
ccccgcaaagggctcttctttgaacatgatctccgaggacaggcccaggaggaggaagtc
aggccgaagggtcgccagcgaaagctatggaaagacgagggccgctgggaacatgacaaa
ttccgggaagatgagcaagcccccaaaagcaggcaggagctgattgcgctctacggctat
gacatcaggtcagctcacaatcccgatgacatcaagccgaggaggatgcgcaaaccacgg
tttgggagccctccgcagcgagagccaaactgggccaacgagaggcaaaacaagccgcca
agacaccaggactctgatagtgctccgctgccgacacgaaccttcatcagccggcactcc
gcaggcatgggtaggatgcccccagccagaaatgttccaagggtgggtggctacaaagag
aaccgtccaagctaccgagctgtggaagcaaacagccagcacctctctcgaacaggtgag
caggctaaacatgagagcagttaccgagcgaggcgtgttgaacaagccccggagagagac
ccctctcctgaagcggagagtgcgcatgttcacagcagtcctgccaagaaggaagagatc
attttggaaagccagaccccaagtacagactctgtacagccgccaccagatagacccatc
gaaaagaaatcctactcccgggccaggaggaccaggaataaagctggcgatgcaggaaag
ctggcagatgaagttccgcctccagaaggattgacacctgtgcctccgaaaccagtgcag
gtcgtgacgccccctccgcctgcgaaggccggtagttgggagacaccagtagaatccagc
atggatggactcgagcaagacatgactcagttgaatctaaccgagcagtcctggacccaa
ggacagcctccgttcataccgcctcgggaacttcggggtattcctaatcatatgcacatg
ggagctggaccaccacctccgtttaacaggatggaggaaatgggagtacaggggggccgt
gcaaaacgttactcatcccagcgtcagcggccaccagttccagagcctgctccccccatg
cacatcagcatcatggaagggcactattatgatccactacaattccagggaccaatctac
acacatagcgagaatcctgccccgttgccacctcagggtatgattgtacagccagaaatg
cacctcccacatccaggtttacatccacaccagacaccagcacctttggctaaccctggc
ttatatcctccaccagtctccatgcctcctgggcaaccgcccccacagcagctgctcgca
cccacctatttctcccctcccggagtcatgaattttgggaatcccagttacccctatccc
ccaggagcacttccacctccaccacctccccatctgtatcccagcacacaggcccaggcc
caggtgtatggaggggtcacctactacaacactgtccagcagcaagtacagccgaaacct
tctcctccacgaagaacatcccagcccgtgactatcaagccgccgcctcccgaggacagc
acaagtgaaaaatcgaaggaaaggagcaatacgtag

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