Chelonia mydas (green sea turtle): 102929618
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Entry
102929618 CDS
T02989
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X3
KO
K14323
protein CASC3
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03013
Nucleocytoplasmic transport
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102929618 (CASC3)
03015 mRNA surveillance pathway
102929618 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102929618 (CASC3)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102929618 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102929618
NCBI-ProteinID:
XP_037742706
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All DBs
Position
27:13043562..13064612
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AA seq
711 aa
AA seq
DB search
MADRRRQRASQDSEDESDSAASDSVDSPAGAARSGSPASPPRPARSAAGTLPAGGRGRGA
ESAAGAAKSPQESECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEESSKVELKQESNNA
SESTGKAEKGEEKPDPKGAVTGERQSGDGQESTEPAENKVGKKVPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQAQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRMRKPRFGSPPQREPNWANERQNKPPRHQDSDSAPLPTRTFISRHS
AGMGRMPPARNVPRVGGYKENRPSYRAVEANSQHLSRTGEQAKHESSYRARRVEQAPERD
PSPEAESAHVHSSPAKKEEIILESQTPSTDSVQPPPDRPIEKKSYSRARRTRNKAGDAGK
LADEVPPPEGLTPVPPKPVQVVTPPPPAKAGSWETPVESSMDGLEQDMTQLNLTEQSWTQ
GQPPFIPPRELRGIPNHMHMGAGPPPPFNRMEEMGVQGGRAKRYSSQRQRPPVPEPAPPM
HISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLANPG
LYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYPSTQAQA
QVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSTSEKSKERSNT
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcagcgggcctcccaggacagtgaggacgagtccgactcggcc
gcctccgacagcgtcgactccccggccggcgcggcccgctccggctcccccgcctcgccc
ccgagaccggcccggagcgccgccgggaccctgccggccgggggccggggccgcggggcc
gagagcgcggccggggccgccaagagcccgcaggagtccgagtgtgaaagtgaagatggc
atcgaaggagatgctgttctctcggattatgaaagtgcagaagactccgaggctgaggaa
ggggagtacagtgaggaggaaagctcaaaggtggagctgaagcaggagagtaacaatgcc
agtgaatccacaggaaaagcagagaaaggggaagagaaacctgacccgaaaggtgctgtg
actggcgagagacaaagcggggatgggcaggagagcactgaaccagctgagaataaagtt
gggaaaaaggtccccaagcacttggatgatgatgaggatcggaagaaccctgcttacata
ccccgcaaagggctcttctttgaacatgatctccgaggacaggcccaggaggaggaagtc
aggccgaagggtcgccagcgaaagctatggaaagacgagggccgctgggaacatgacaaa
ttccgggaagatgagcaagcccccaaaagcaggcaggagctgattgcgctctacggctat
gacatcaggtcagctcacaatcccgatgacatcaagccgaggaggatgcgcaaaccacgg
tttgggagccctccgcagcgagagccaaactgggccaacgagaggcaaaacaagccgcca
agacaccaggactctgatagtgctccgctgccgacacgaaccttcatcagccggcactcc
gcaggcatgggtaggatgcccccagccagaaatgttccaagggtgggtggctacaaagag
aaccgtccaagctaccgagctgtggaagcaaacagccagcacctctctcgaacaggtgag
caggctaaacatgagagcagttaccgagcgaggcgtgttgaacaagccccggagagagac
ccctctcctgaagcggagagtgcgcatgttcacagcagtcctgccaagaaggaagagatc
attttggaaagccagaccccaagtacagactctgtacagccgccaccagatagacccatc
gaaaagaaatcctactcccgggccaggaggaccaggaataaagctggcgatgcaggaaag
ctggcagatgaagttccgcctccagaaggattgacacctgtgcctccgaaaccagtgcag
gtcgtgacgccccctccgcctgcgaaggccggtagttgggagacaccagtagaatccagc
atggatggactcgagcaagacatgactcagttgaatctaaccgagcagtcctggacccaa
ggacagcctccgttcataccgcctcgggaacttcggggtattcctaatcatatgcacatg
ggagctggaccaccacctccgtttaacaggatggaggaaatgggagtacaggggggccgt
gcaaaacgttactcatcccagcgtcagcggccaccagttccagagcctgctccccccatg
cacatcagcatcatggaagggcactattatgatccactacaattccagggaccaatctac
acacatagcgagaatcctgccccgttgccacctcagggtatgattgtacagccagaaatg
cacctcccacatccaggtttacatccacaccagacaccagcacctttggctaaccctggc
ttatatcctccaccagtctccatgcctcctgggcaaccgcccccacagcagctgctcgca
cccacctatttctcccctcccggagtcatgaattttgggaatcccagttacccctatccc
ccaggagcacttccacctccaccacctccccatctgtatcccagcacacaggcccaggcc
caggtgtatggaggggtcacctactacaacactgtccagcagcaagtacagccgaaacct
tctcctccacgaagaacatcccagcccgtgactatcaagccgccgcctcccgaggacagc
acaagtgaaaaatcgaaggaaaggagcaatacgtag
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